Pc13g10670 (Penicillium chrysogenum)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 Pc13g10670 T343297_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.922 0.922
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.922 0.922
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.922 0.922
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.820 0.820
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.820 0.820
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.820 0.820
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.820 0.820
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.820 0.820
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.820 0.820
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.820 0.820
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.820 0.820
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.820 0.820
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.820 0.820
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pc13g10670.t1 TBP 89 171
Pc13g10670.t1 TBP 179 262

Links

Other TBP family TFs
Other Penicillium chrysogenum TFs

751 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NTL9 Arabidopsis thaliana AT4G35580 D 0.000
Cagra.2350s0100 Capsella grandiflora Cagra.2350s0100 I 0.000
PK02019.1 Cannabis sativa PK02019.1 I 0.000
Carubv10007613m.g Capsella rubella Carubv10007613m.g I 0.000
Carubv10008529m.g Capsella rubella Carubv10008529m.g I 0.000
Ciclev10019282m.g Citrus clementina Ciclev10019282m.g I 0.000
Eucgr.E01095 Eucalyptus grandis Eucgr.E01095 I 0.000
evm.TU.supercontig_37.112 Carica papaya evm.TU.supercontig_37.112 I 0.000
gene01851-v1.0-hybrid Fragaria vesca gene01851-v1.0-hybrid I 0.000
Gorai.003G073300 Gossypium raimondii Gorai.003G073300 I 0.000
Gorai.008G261400 Gossypium raimondii Gorai.008G261400 I 0.000
Lus10008285.g Linum usitatissimum Lus10008285.g I 0.000
Lus10010148.g Linum usitatissimum Lus10010148.g I 0.000
Lus10033251.g Linum usitatissimum Lus10033251.g I 0.000
MDP0000266908 Malus domestica MDP0000266908 I 0.000
MDP0000658409 Malus domestica MDP0000658409 I 0.000
orange1.1g009388m.g Citrus sinensis orange1.1g009388m.g I 0.000
SapurV1A.0285s0090 Salix purpurea SapurV1A.0285s0090 I 0.000
Thhalv10007021m.g Eutrema salsugineum Thhalv10007021m.g I 0.000
NAC014 Arabidopsis thaliana AT1G33060 I 0.000
VIT_02s0025g03020 Vitis vinifera VIT_02s0025g03020 I 0.000
Bo5g086780 Brassica oleracea Bo5g086780 I 0.000
Bra010193 Brassica rapa Bra010193 I 0.000
ANAC014 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1002639 I 0.000
NTL9 Arabidopsis lyrata fgenesh2_kg.7__521__AT4G35580.1 I 0.000
POPTR_0001s45700 Populus trichocarpa POPTR_0001s45700 I 0.000
POPTR_0011s15230 Populus trichocarpa POPTR_0011s15230 I 0.000
PRUPE_ppa001291mg Prunus persica PRUPE_ppa001291mg I 0.000
TCM_015584 Theobroma cacao TCM_015584 I 0.000
Cagra.1443s0001 Capsella grandiflora Cagra.1443s0001 I 0.000
VIT_16s0098g00760 Vitis vinifera VIT_16s0098g00760 I 0.000
VIT_18s0001g01820 Vitis vinifera VIT_18s0001g01820 I 0.000
Pm029581 Prunus mume Pm029581 I 0.000
30068.m002619 Ricinus communis 30068.m002619 I 0.000
mgf022344m Mimulus guttatus mgf022344m I 0.000
Aquca_020_00034 Aquilegia coerulea Aquca_020_00034 I 0.000
Aquca_020_00035 Aquilegia coerulea Aquca_020_00035 I 0.000
Bostr.3359s0059 Boechera stricta Bostr.3359s0059 I 0.000
Bostr.7867s1416 Boechera stricta Bostr.7867s1416 I 0.000
SapurV1A.0666s0060 Salix purpurea SapurV1A.0666s0060 N 0.000