CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf01153-augustus-gene-0.12
(
Meloidogyne floridensis
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
maker-nMf.1.1.scaf01153-augustus-gene-0.12
T343541_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf01153-augustus-gene-0.12-mRNA-1
TBP
4
68
LGFAITHYQFSTYEPELFPGLIYRMVKPRVVLLIFLSGKVVITGARKREHIDEAFSQVYPILKRF
Links
Other
TBP
family TFs
Other
Meloidogyne floridensis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DICVIV_08943
Dictyocaulus viviparus
DICVIV_08943
N
0.769
OESDEN_20402
Oesophagostomum dentatum
OESDEN_20402
N
0.783
SVUK_0000128801
Strongylus vulgaris
SVUK_0000128801
N
0.783