CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g04880
(
Acanthocheilonema viteae
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
nAv.1.0.1.g04880
T343553_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t04880-RA
TBP
131
212
DIQIRNVVCNYTLPLHIDLHRVALSSGNVAFDRGRGVLLKQKRNPSCYVKIYSSGKIYIVGCRSESECKRAARGVARMVQKS
nAv.1.0.1.t04880-RA
TBP
224
263
NYRVCNVLATCKMPFGVKIEEIVLNMNQNYQLASYGVLQI
nAv.1.0.1.t04880-RA
TBP
278
302
LLEATASENDVMKAIEVIYPIIKEF
Links
Other
TBP
family TFs
Other
Acanthocheilonema viteae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_02128
Loa loa
LOAG_02128
N
0.705
EEL_0000453801
Elaeophora elaphi
EEL_0000453801
N
0.705
nDi.2.2.2.g05314
Dirofilaria immitis
nDi.2.2.2.g05314
N
0.705
nLs.2.1.2.g03126
Litomosoides sigmodontis
nLs.2.1.2.g03126
N
0.712
nOo.2.0.1.g03279
Onchocerca ochengi
nOo.2.0.1.g03279
N
0.815