GLYMA17G13065 (Glycine max)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 GLYMA17G13065 T343896_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.841 0.371
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA17G13065.1 TCP 120 270

Links

Other TCP family TFs
Other Glycine max TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK12240.1 Cannabis sativa PK12240.1 D 0.841
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.838
BRC2 Arabidopsis thaliana AT1G68800 I 0.855
BRC1 Arabidopsis thaliana AT3G18550 I 0.878
Bo1g117490 Brassica oleracea Bo1g117490 I 0.868
Bo3g071560 Brassica oleracea Bo3g071560 I 0.865
Bra001710 Brassica rapa Bra001710 I 0.871
Bra004097 Brassica rapa Bra004097 I 0.833
Bra037579 Brassica rapa Bra037579 I 0.872
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.827
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.841
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.863
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.950
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.953
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.868
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.843
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.832
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.856
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.833
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.928
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.841
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.852
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.824
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.838
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.823
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.825
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.837
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.884
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.884
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.842
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.912
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.864
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.838
Si015230m.g Setaria italica Si015230m.g I 0.826
Si033183m.g Setaria italica Si033183m.g I 0.824
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.828
TCM_011874 Theobroma cacao TCM_011874 I 0.847
TCM_012252 Theobroma cacao TCM_012252 I 0.920
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.848
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.848
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.848
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.838
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.862
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.848
Pm015499 Prunus mume Pm015499 I 0.864
Pm030202 Prunus mume Pm030202 I 0.912
30167.m000856 Ricinus communis 30167.m000856 I 0.852
30174.m008721 Ricinus communis 30174.m008721 I 0.878
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.858
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.839
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.882
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.869
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.830
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.848
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.859
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.846
mgf024687m Mimulus guttatus mgf024687m I 0.862
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.860
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.864
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.889
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.872
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.841
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.851
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.872
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.861
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.861
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.872
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.846
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.910
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.922
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.855
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.855
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.845
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.828
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.839
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.885
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.833
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.916
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.866
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.889
MDP0000272980 Malus domestica MDP0000272980 I 0.842
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.910
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.828
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.829
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.866
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.850
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.883
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.856
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.870
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.870
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.839
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.947
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.842
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.929
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.848
Bo5g117410 Brassica oleracea Bo5g117410 N 0.854
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.920
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.861
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.857
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.862
Cla018797 Citrullus lanatus Cla018797 N 0.873
Cla019282 Citrullus lanatus Cla019282 N 0.892
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.917
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.898
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.891
MDP0000219838 Malus domestica MDP0000219838 N 0.902
MDP0000224810 Malus domestica MDP0000224810 N 0.910
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.883