CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G359599
(
Zea mays
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03634 (TCP)
IPR005333
GRMZM2G359599
T343939_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G359599_P01
TCP
1
154
MRLSVGVAREFLALQDRLGFDKASKTLNWLLAQSKPPIDCLVDAADQVAVVTGGRPTLVKGREQGSNSSTCCLTDLRWDKRLNCSKCVTYCFQILGVGKTTSQQEIKKAYHKLALRLHPDKNPGDEVAEADIEEFEAKYRGSDYEKTDLKDLYT
GRMZM2G359599_P02
TCP
1
127
MRLSVGVAREFLALQDRLGFDKASKTLNWLLAQSKPPIDCLVDAADQVAVVTGGRPTLVKGREQGSNSSTCCLTDLRWDKRLNCSKCVTYCFQILGVGKTTSQQEIKKAYHKLALRLHPDKNPGDEV
Links
Other
TCP
family TFs
Other
Zea mays
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G060319
Zea mays
GRMZM2G060319
I
0.845
Pavir.Fb01590
Panicum virgatum
Pavir.Fb01590
I
0.851
Si015230m.g
Setaria italica
Si015230m.g
I
0.823
Sb07g021140
Sorghum bicolor
Sb07g021140
I
0.845
PGSC0003DMG400005705
Solanum tuberosum
PGSC0003DMG400005705
I
0.843
OB03G38320
Oryza brachyantha
OB03G38320
I
0.830
MLOC_58142
Hordeum vulgare
MLOC_58142
I
0.929
GRMZM2G166687
Zea mays
GRMZM2G166687
I
0.897
GRMZM2G414114
Zea mays
GRMZM2G414114
N
0.962
GRMZM2G424261
Zea mays
GRMZM2G424261
N
0.930
GRMZM2G458087
Zea mays
GRMZM2G458087
N
0.912
GRMZM2G170232
Zea mays
GRMZM2G170232
N
0.981
GRMZM2G135461
Zea mays
GRMZM2G135461
N
0.955
GRMZM2G088440
Zea mays
GRMZM2G088440
N
0.903
Traes_2BS_03909B330
Triticum aestivum
Traes_2BS_03909B330
N
0.917
Traes_2DS_4C8E5F416
Triticum aestivum
Traes_2DS_4C8E5F416
N
0.934
AC234521.1_FG006
Zea mays
AC234521.1_FG006
N
0.936