OB03G38320 (Oryza brachyantha)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OB03G38320 T344054_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.912 0.793
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB03G38320.1 TCP 1 140

Links

Other TCP family TFs
Other Oryza brachyantha TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TB1 Oryza sativa OS03G0706500 D 0.912
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.912
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.855
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.863
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.886
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.886
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.886
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.886
Si038692m.g Setaria italica Si038692m.g I 0.839
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.883
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.845
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.912
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.901
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.951
AC190734.2_FG003 Zea mays AC190734.2_FG003 I 0.907
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.912
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.913
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.912
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.835
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.867
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.855
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.877
OBART03G31290 Oryza barthii OBART03G31290 I 0.901
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.889
GRMZM2G359599 Zea mays GRMZM2G359599 N 0.830
GRMZM2G170232 Zea mays GRMZM2G170232 N 0.829
GRMZM2G135461 Zea mays GRMZM2G135461 N 0.833
Traes_2BS_03909B330 Triticum aestivum Traes_2BS_03909B330 N 0.888
Traes_2DS_4C8E5F416 Triticum aestivum Traes_2DS_4C8E5F416 N 0.855
GRMZM2G088440 Zea mays GRMZM2G088440 N 0.824
F775_01449 Aegilops tauschii F775_01449 N 0.862
AC234521.1_FG006 Zea mays AC234521.1_FG006 N 0.854