OLONG_002570 (Oryza longistaminata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OLONG_002570 T344108_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.597 1.000
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_002570-R1 TCP 1 107

Links

Other TCP family TFs
Other Oryza longistaminata TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TB1 Oryza sativa OS03G0706500 D 0.597
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.597
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.597
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.597
fgenesh1_pg.C_scaffold_4001082 Cryphonectria parasitica fgenesh1_pg.C_scaffold_4001082 N 0.920
EFA80760.1 Polysphondylium pallidum EFA80760.1 N 0.825
Pavir.Fa00930 Panicum virgatum Pavir.Fa00930 N 0.928
Lus10042195.g Linum usitatissimum Lus10042195.g N 0.880
Lus10019949.g Linum usitatissimum Lus10019949.g N 0.893
fgenesh2_pg.scaffold_12000136 Monosiga brevicollis fgenesh2_pg.scaffold_12000136 N 0.931
Hsal_00106--NA Harpegnathos saltator Hsal_00106--NA N 0.927
ZBAI_00205 Zygosaccharomyces bailii ZBAI_00205 N 0.918
TRIUR3_02266 Triticum urartu TRIUR3_02266 N 0.934
BGLB003577 Biomphalaria glabrata BGLB003577 N 0.926
CAOG_03637 Capsaspora owczarzaki CAOG_03637 N 0.922
PVAR5_0486 Byssochlamys spectabilis PVAR5_0486 N 0.929
CGOC_0000468301 Cylicostephanus goldi CGOC_0000468301 N 0.929
ORUFI12G05060 Oryza rufipogon ORUFI12G05060 N 0.931
ORUFI11G04600 Oryza rufipogon ORUFI11G04600 N 0.933
JL09_g6305 Pichia kudriavzevii JL09_g6305 N 0.925
H311_00925 Anncaliia algerae H311_00925 N 0.925
GE16904 Drosophila yakuba FBgn0234394 N 0.884
GK18872 Drosophila willistoni FBgn0220870 N 0.907
GF19613 Drosophila ananassae FBgn0096620 N 0.909
BLOC1S6 Sorex araneus ENSSARG00000009861 N 0.926
Sec61g-ps1 Rattus norvegicus ENSRNOG00000049451 N 0.915
Sec61gl Rattus norvegicus ENSRNOG00000049016 N 0.915
BLOC1S6 Loxodonta africana ENSLAFG00000000655 N 0.926
TRIM56 Anolis carolinensis ENSACAG00000007859 N 0.836
Bra032973 Brassica rapa Bra032973 N 0.849