CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aquca_002_01093
(
Aquilegia coerulea
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
Aquca_002_01093
T344685_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK12240.1
M01314_2.00
Cannabis sativa
GGGSCCMS
SKGGSCCC
PBM
Lambert et al.(2019)
pTH10180
0.923
0.432
TCP1
M07276_2.00
Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY
Dap-seq
OMalley et al.(2016)
TCP1_col_a
0.845
0.411
PK19717.1
M01318_2.00
Cannabis sativa
GGGSCCCMC
GKGGGSCCC
PBM
Lambert et al.(2019)
pTH10142
0.845
0.459
TB1
M01312_2.00
Oryza sativa
GGSCCCCCYM
KRGGGGGSCC
PBM
Lambert et al.(2019)
pTH8740
0.836
0.432
For this family, TFs with SR scores >
0.822
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aquca_002_01093.1
TCP
82
227
SGKKDRHSKIVTAQGTRDRRMRLSLEIARKFFDLQDILGFDKASKTVEWLLGKSEEAINELRKGCTGETKSTVSSTSECDVVSEIDERQKGLTKVDEKQSIDGIVLREKTTTKMLSRTTCHILAKDSRVKARARARERTLEKMSRL
Links
Other
TCP
family TFs
Other
Aquilegia coerulea
TFs
137 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF366
Sus scrofa
ENSSSCG00000016976
N
ZNF366
Oryctolagus cuniculus
ENSOCUG00000004571
N
ZNF366
Otolemur garnettii
ENSOGAG00000008393
N
ENSONIG00000015237
Oreochromis niloticus
ENSONIG00000015237
N
znf366
Oryzias latipes
ENSORLG00000003805
N
ENSPANG00000023914
Papio anubis
ENSPANG00000023914
N
ENSPFOG00000007607
Poecilia formosa
ENSPFOG00000007607
N
ENSPPYG00000015544
Pongo abelii
ENSPPYG00000015544
N
ENSPSIG00000014530
Pelodiscus sinensis
ENSPSIG00000014530
N
ZNF366
Pan troglodytes
ENSPTRG00000016969
N
ZNF366
Pteropus vampyrus
ENSPVAG00000010937
N
Zfp366
Rattus norvegicus
ENSRNOG00000017249
N
ZNF366
Sorex araneus
ENSSARG00000010412
N
ENSSHAG00000004351
Sarcophilus harrisii
ENSSHAG00000004351
N
ENSOARG00000005075
Ovis aries
ENSOARG00000005075
N
ENSSTOG00000029102
Ictidomys tridecemlineatus
ENSSTOG00000029102
N
ZNF366
Taeniopygia guttata
ENSTGUG00000005717
N
znf366
Tetraodon nigroviridis
ENSTNIG00000016682
N
znf366
Takifugu rubripes
ENSTRUG00000015639
N
ZNF366
Tursiops truncatus
ENSTTRG00000011858
N
ENSXMAG00000016095
Xiphophorus maculatus
ENSXMAG00000016095
N
Cmyd_10009121
Chelonia mydas
Cmyd_10009121
N
ENSP00000313158-D1
Bos grunniens
ENSP00000313158-D1
N
ENSP00000313158
Macaca fascicularis
ENSP00000313158
N
Myotis_brandtii_ZNF366_10035915
Myotis brandtii
Myotis_brandtii_ZNF366_10035915
N
Ogr16419
Ophisaurus gracilis
Ogr16419
N
Pvit_17551
Pogona vitticeps
Pvit_17551
N
znf366
Xenopus tropicalis
XB-GENE-6464910
N
znf366
Gasterosteus aculeatus
ENSGACG00000006566
N
ENSAMXG00000006287
Astyanax mexicanus
ENSAMXG00000006287
N
ZNF366
Bos taurus
ENSBTAG00000020601
N
ZNF366
Canis familiaris
ENSCAFG00000007986
N
ZNF366
Callithrix jacchus
ENSCJAG00000016387
N
ZNF366
Cavia porcellus
ENSCPOG00000007542
N
ENSCSAG00000015620
Chlorocebus sabaeus
ENSCSAG00000015620
N
znf366
Danio rerio
ENSDARG00000040116
N
ZNF366
Dasypus novemcinctus
ENSDNOG00000046166
N
Zfp366
Dipodomys ordii
ENSDORG00000000338
N
ZNF366
Equus caballus
ENSECAG00000006723
N
ENSFALG00000010297
Ficedula albicollis
ENSFALG00000010297
N
ZNF366
Felis catus
ENSFCAG00000005456
N
ZNF366
Homo sapiens
ENSG00000178175
N
ENSAMEG00000007185
Ailuropoda melanoleuca
ENSAMEG00000007185
N
ZNF366
Gallus gallus
ENSGALG00000015008
N
ZNF366
Gorilla gorilla
ENSGGOG00000004981
N
ENSGMOG00000007538
Gadus morhua
ENSGMOG00000007538
N
ENSLACG00000013704
Latimeria chalumnae
ENSLACG00000013704
N
ZNF366
Loxodonta africana
ENSLAFG00000030138
N
ENSLOCG00000011104
Lepisosteus oculatus
ENSLOCG00000011104
N
ENSMEUG00000015869
Macropus eugenii
ENSMEUG00000015869
N
ZNF366
Monodelphis domestica
ENSMODG00000001702
N
ENSMPUG00000014399
Mustela putorius furo
ENSMPUG00000014399
N
Zfp366
Mus musculus
ENSMUSG00000050919
N
ENSNLEG00000004555
Nomascus leucogenys
ENSNLEG00000004555
N
ZNF366
Ornithorhynchus anatinus
ENSOANG00000015788
N