CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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tead1a
(
Gasterosteus aculeatus
)
TEA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01285 (TEA)
IPR000818
ENSGACG00000003385
T346532_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ENSTNIG00000008857_CONSTRUCT
M01323_2.00
PBM CONSTRUCTS
NRGWATKYN
NRMATWCYN
PBM
Lambert et al.(2019)
pTH9815
0.928
0.928
TEAD1
M03577_2.00
Homo sapiens
DHGGAATGYN
NRCATTCCDH
SELEX
Jolma et al.(2013)
TEAD1_1
0.819
0.819
TEAD2
M05823_2.00
Homo sapiens
NWGGAATGYR
YRCATTCCWN
SELEX
Yin et al.(2017)
TEAD2_FL_HT-SELEX
0.702
0.702
TEAD1
M03578_2.00
Homo sapiens
HGGWATKYNHGGAATGY
RCATTCCDNRMATWCCD
SELEX
Jolma et al.(2013)
TEAD1_2
0.819
0.819
TEAD2
M08175_2.00
Homo sapiens
NNNWGGAATGTNN
NNACATTCCWNNN
ChIP-seq
Mathelier et al.(2014)
MA1121.1
0.702
0.702
TEAD1
M05825_2.00
Homo sapiens
HGGWATGYN
NRCATWCCD
SELEX
Yin et al.(2017)
TEAD1_FL_HT-SELEX
0.819
0.819
Tead2
M09437_2.00
Mus musculus
SCWGGAATGYNN
NNRCATTCCWGS
Misc
Kulakovskiy et al.(2013)
TEAD2_MOUSE.H11MO.0.C
0.702
0.702
Tead2
M09653_2.00
Mus musculus
BCWGGAATGY
RCATTCCWGV
Misc
Heinz et al.(2010)
Py2T-Tead2_GSE55709
0.702
0.702
TEAD2
M11403_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ETF_Q6_01
0.702
0.702
TEAD2
M05824_2.00
Homo sapiens
NHGGAATGYR
YRCATTCCDN
SELEX
Yin et al.(2017)
TEAD2_FL_Methyl-HT-SELEX
0.702
0.702
TEAD1
M09434_2.00
Homo sapiens
DBBNWGGAATGY
RCATTCCWNVVH
Misc
Kulakovskiy et al.(2013)
TEAD1_HUMAN.H11MO.0.A
0.819
0.819
TEAD1
M11404_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_01
0.819
0.819
TEAD1
M11405_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_07
0.819
0.819
TEAD1
M11406_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF1_Q6_03
0.819
0.819
TEAD1
M11407_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF1_Q6_04
0.819
0.819
TEAD1
M11408_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF1_Q6
0.819
0.819
TEAD1
M05826_2.00
Homo sapiens
HGGWATGYN
NRCATWCCD
SELEX
Yin et al.(2017)
TEAD1_FL_Methyl-HT-SELEX
0.819
0.819
TEAD4
M03579_2.00
Homo sapiens
NHRGAATKYN
NRMATTCYDN
SELEX
Jolma et al.(2013)
TEAD4_1
0.807
0.807
sd
M03995_2.00
Drosophila melanogaster
HGGAATGYRN
NYRCATTCCD
SELEX
Nitta et al.(2015)
sd_1
0.807
0.807
sd
M03996_2.00
Drosophila melanogaster
DDWGGAATGYRN
NYRCATTCCWHH
SELEX
Nitta et al.(2015)
sd_2
0.807
0.807
sd
M06455_2.00
Drosophila melanogaster
NYBHNRWATKWH
DWMATWYNDVRN
B1H
Zhu et al.(2011)
sd_FlyReg_FBgn0003345
0.807
0.807
sd
M07545_2.00
Drosophila melanogaster
NYBHNRWATKWH
DWMATWYNDVRN
DNaseI footprinting
Mathelier et al.(2014)
MA0243.1
0.807
0.807
TEAD4
M09435_2.00
Homo sapiens
NDBNNWGGAATKY
RMATTCCWNNVHN
Misc
Kulakovskiy et al.(2013)
TEAD4_HUMAN.H11MO.0.A
0.807
0.807
sd
M11410_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$SD_Q6
0.807
0.807
TEAD4
M11409_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF3_Q3
0.807
0.807
Tead1
M09438_2.00
Mus musculus
BSYWGGAATGY
RCATTCCWRSV
Misc
Kulakovskiy et al.(2013)
TEAD1_MOUSE.H11MO.0.A
0.795
0.795
TEAD3
M03575_2.00
Homo sapiens
HGGWATGHNHRGAATGY
RCATTCYDNDCATWCCD
SELEX
Jolma et al.(2013)
TEAD3_1
0.783
0.783
TEAD3
M03576_2.00
Homo sapiens
HGGAATGY
RCATTCCD
SELEX
Jolma et al.(2013)
TEAD3_2
0.783
0.783
TEAD3
M11401_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF5_Q2
0.783
0.783
TEAD3
M11402_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF5_Q6_01
0.783
0.783
Tead4
M09436_2.00
Mus musculus
VNRHBHNWGGAATKY
RMATTCCWNDVDYNB
Misc
Kulakovskiy et al.(2013)
TEAD4_MOUSE.H11MO.0.A
0.723
0.723
Tead4
M09652_2.00
Mus musculus
NNNGGAATBY
RVATTCCNNN
Misc
Heinz et al.(2010)
Tropoblast-Tead4_GSE37350
0.723
0.723
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000004460
TEA
19
105
ERLSDSGGDKTMDGDPEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKS
ENSGACP00000004465
TEA
17
281
ERLSDSGGDKTMDGDPEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARRKSREFQSKLKDQNAKEKALQSISSMSSAQIVSATAIHSKLLPGIVRSSFPSNAQLWQGMIPGGQSSSTTEDIKPFSQQAYTVQTAGTTTISAYEPPTAAQTHREPAWQGRSIGTTKLRLVEFSSFLETQRDQEAYNKHLFVNISQSSMSYSDPMLECVDIRQIYDKFPEKKGGLKELFGK
ENSGACP00000004468
TEA
17
108
ERLSDSGGDKTMDGDPEGVWSPDIEQSFQEALAIYPPCGRRKIILSDEGKMYGRNELIARYIKLRTGKTRTRKQDQNAKEKALQSISSMSSA
Links
Other
TEA
family TFs
Other
Gasterosteus aculeatus
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WRKY63
Arabidopsis thaliana
AT1G66600
D
WRKY62
Arabidopsis thaliana
AT5G01900
D
WRKY38
Arabidopsis thaliana
AT5G22570
D
AC205562.3_FG002
Zea mays
AC205562.3_FG002
I
Al_scaffold_0002_1233
Arabidopsis lyrata
Al_scaffold_0002_1233
I
WRKY62
Arabidopsis lyrata
Al_scaffold_0006_13
I
WRKY66
Arabidopsis thaliana
AT1G80590
I
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
BGIOSGA017556
Oryza indica
BGIOSGA017556
I
BGIOSGA017860
Oryza indica
BGIOSGA017860
I
BGIOSGA030535
Oryza indica
BGIOSGA030535
I
BGIOSGA034612
Oryza indica
BGIOSGA034612
I
Bo2g095820
Brassica oleracea
Bo2g095820
I
Bo5g068250
Brassica oleracea
Bo5g068250
I
Bra008459
Brassica rapa
Bra008459
I
Bra023211
Brassica rapa
Bra023211
I
Bra028918
Brassica rapa
Bra028918
I
BRADI1G17660
Brachypodium distachyon
BRADI1G17660
I
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
BRADI2G44270
Brachypodium distachyon
BRADI2G44270
I
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
BRADI2G53520
Brachypodium distachyon
BRADI2G53520
I
BRADI4G44350
Brachypodium distachyon
BRADI4G44350
I
BRADI4G44360
Brachypodium distachyon
BRADI4G44360
I
F775_00757
Aegilops tauschii
F775_00757
I
F775_00860
Aegilops tauschii
F775_00860
I
F775_03184
Aegilops tauschii
F775_03184
I
F775_07376
Aegilops tauschii
F775_07376
I
F775_07845
Aegilops tauschii
F775_07845
I
F775_22808
Aegilops tauschii
F775_22808
I
F775_23182
Aegilops tauschii
F775_23182
I
F775_25840
Aegilops tauschii
F775_25840
I
GLYMA09G41050
Glycine max
GLYMA09G41050
I
GRMZM2G004060
Zea mays
GRMZM2G004060
I
GRMZM2G059562
Zea mays
GRMZM2G059562
I
GSMUA_Achr5G08580_001
Musa acuminata
GSMUA_Achr5G08580_001
I
GSMUA_Achr8G25110_001
Musa acuminata
GSMUA_Achr8G25110_001
I
LPERR01G30490
Leersia perrieri
LPERR01G30490
I
LPERR05G16170
Leersia perrieri
LPERR05G16170
I
LPERR11G00960
Leersia perrieri
LPERR11G00960
I
LPERR12G01070
Leersia perrieri
LPERR12G01070
I
MLOC_5971
Hordeum vulgare
MLOC_5971
I
MLOC_68061
Hordeum vulgare
MLOC_68061
I
MLOC_71897
Hordeum vulgare
MLOC_71897
I
MLOC_74974
Hordeum vulgare
MLOC_74974
I
MLOC_78461
Hordeum vulgare
MLOC_78461
I
MTR_7g073380
Medicago truncatula
MTR_7g073380
I
OB01G44140
Oryza brachyantha
OB01G44140
I
OB03G26140
Oryza brachyantha
OB03G26140
I
OB05G17240
Oryza brachyantha
OB05G17240
I
OB05G27830
Oryza brachyantha
OB05G27830
I
OBART05G08130
Oryza barthii
OBART05G08130
I
OBART05G20340
Oryza barthii
OBART05G20340
I
OBART11G01110
Oryza barthii
OBART11G01110
I
OGLUM05G08540
Oryza glumaepatula
OGLUM05G08540
I
OGLUM05G21470
Oryza glumaepatula
OGLUM05G21470
I
OGLUM11G00850
Oryza glumaepatula
OGLUM11G00850
I
OGLUM11G00870
Oryza glumaepatula
OGLUM11G00870
I
OLONG_019907
Oryza longistaminata
OLONG_019907
I
OLONG_027124
Oryza longistaminata
OLONG_027124
I
OMERI01G32490
Oryza meridionalis
OMERI01G32490
I
OMERI05G18250
Oryza meridionalis
OMERI05G18250
I
OMERI05G18260
Oryza meridionalis
OMERI05G18260
I
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
ONIVA05G08650
Oryza nivara
ONIVA05G08650
I
ONIVA05G21460
Oryza nivara
ONIVA05G21460
I
ONIVA09G05410
Oryza nivara
ONIVA09G05410
I
ONIVA11G01240
Oryza nivara
ONIVA11G01240
I
OPUNC05G07410
Oryza punctata
OPUNC05G07410
I
OPUNC05G17980
Oryza punctata
OPUNC05G17980
I
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
ORGLA05G0070000
Oryza glaberrima
ORGLA05G0070000
I
ORGLA11G0202000
Oryza glaberrima
ORGLA11G0202000
I
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
ORUFI05G08750
Oryza rufipogon
ORUFI05G08750
I
ORUFI05G21600
Oryza rufipogon
ORUFI05G21600
I
ORUFI09G06720
Oryza rufipogon
ORUFI09G06720
I
OS01G0820700
Oryza sativa
OS01G0820700
I
OS05G0478800
Oryza sativa
OS05G0478800
I
OS09G0334500
Oryza sativa
OS09G0334500
I
PGSC0003DMG400005835
Solanum tuberosum
PGSC0003DMG400005835
I
PGSC0003DMG400019884
Solanum tuberosum
PGSC0003DMG400019884
I
PRUPE_ppa008573mg
Prunus persica
PRUPE_ppa008573mg
I
PRUPE_ppa020736mg
Prunus persica
PRUPE_ppa020736mg
I
Sb02g022280
Sorghum bicolor
Sb02g022280
I
Sb02g022290
Sorghum bicolor
Sb02g022290
I
Sb03g038210
Sorghum bicolor
Sb03g038210
I
Sb07g019400
Sorghum bicolor
Sb07g019400
I
WRKY38
Arabidopsis lyrata
scaffold_602308.1
I
Si025181m.g
Setaria italica
Si025181m.g
I
Si028202m.g
Setaria italica
Si028202m.g
I
Si036565m.g
Setaria italica
Si036565m.g
I
Solyc08g008280.2
Solanum lycopersicum
Solyc08g008280.2
I
Solyc10g009550.2
Solanum lycopersicum
Solyc10g009550.2
I
TCM_006103
Theobroma cacao
TCM_006103
I
TCM_019689
Theobroma cacao
TCM_019689
I
Traes_2AS_6269D889E
Triticum aestivum
Traes_2AS_6269D889E
I
Traes_2BS_B65714572
Triticum aestivum
Traes_2BS_B65714572
I
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
TRAES3BF001300030CFD_g
Triticum aestivum
TRAES3BF001300030CFD_g
I
TRAES3BF005100010CFD_g
Triticum aestivum
TRAES3BF005100010CFD_g
I
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I
Traes_4AS_0DA136E0E
Triticum aestivum
Traes_4AS_0DA136E0E
I
Traes_5AL_B4E8A3115
Triticum aestivum
Traes_5AL_B4E8A3115
I
TRIUR3_14306
Triticum urartu
TRIUR3_14306
I
TRIUR3_17401
Triticum urartu
TRIUR3_17401
I
TRIUR3_22128
Triticum urartu
TRIUR3_22128
I
VIT_08s0058g01390
Vitis vinifera
VIT_08s0058g01390
I
VIT_13s0067g03140
Vitis vinifera
VIT_13s0067g03140
I
Ca_09495
Cicer arietinum
Ca_09495
I
Ca_12915
Cicer arietinum
Ca_12915
I
Ca_18932
Cicer arietinum
Ca_18932
I
Pm003014
Prunus mume
Pm003014
I
Pm024064
Prunus mume
Pm024064
I
mgf009193m
Mimulus guttatus
mgf009193m
I
Bostr.20129s0455
Boechera stricta
Bostr.20129s0455
I
Bostr.26527s0018
Boechera stricta
Bostr.26527s0018
I
Bostr.26959s0262
Boechera stricta
Bostr.26959s0262
I
Bostr.6251s0160
Boechera stricta
Bostr.6251s0160
I
Cagra.0255s0014
Capsella grandiflora
Cagra.0255s0014
I
Cagra.15225s0001
Capsella grandiflora
Cagra.15225s0001
I
Carubv10012720m.g
Capsella rubella
Carubv10012720m.g
I
Carubv10021420m.g
Capsella rubella
Carubv10021420m.g
I
Carubv10021860m.g
Capsella rubella
Carubv10021860m.g
I
Carubv10021899m.g
Capsella rubella
Carubv10021899m.g
I
Carubv10022162m.g
Capsella rubella
Carubv10022162m.g
I
gene13549-v1.0-hybrid
Fragaria vesca
gene13549-v1.0-hybrid
I
Gorai.010G219200
Gossypium raimondii
Gorai.010G219200
I
Gorai.013G008300
Gossypium raimondii
Gorai.013G008300
I
MDP0000146360
Malus domestica
MDP0000146360
I
MDP0000299114
Malus domestica
MDP0000299114
I
MDP0000315045
Malus domestica
MDP0000315045
I
MDP0000754989
Malus domestica
MDP0000754989
I
Pavir.Ba02545
Panicum virgatum
Pavir.Ba02545
I
Pavir.Bb02088
Panicum virgatum
Pavir.Bb02088
I
Pavir.Ca00459
Panicum virgatum
Pavir.Ca00459
I
Pavir.Cb02194
Panicum virgatum
Pavir.Cb02194
I
Pavir.Ea03258
Panicum virgatum
Pavir.Ea03258
I
Pavir.Eb03563
Panicum virgatum
Pavir.Eb03563
I
Pavir.Ha01933
Panicum virgatum
Pavir.Ha01933
I
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
Pavir.J39511
Panicum virgatum
Pavir.J39511
I
Thhalv10000686m.g
Eutrema salsugineum
Thhalv10000686m.g
I
Thhalv10014700m.g
Eutrema salsugineum
Thhalv10014700m.g
I
Thhalv10015295m.g
Eutrema salsugineum
Thhalv10015295m.g
I
PDK_20s1314561g002
Phoenix dactylifera
PDK_20s1314561g002
I
BGIOSGA012523
Oryza indica
BGIOSGA012523
N
BGIOSGA012525
Oryza indica
BGIOSGA012525
N
BGIOSGA036756
Oryza indica
BGIOSGA036756
N
BRADI1G63910
Brachypodium distachyon
BRADI1G63910
N
BRADI2G53500
Brachypodium distachyon
BRADI2G53500
N
BRADI4G44370
Brachypodium distachyon
BRADI4G44370
N
F775_02479
Aegilops tauschii
F775_02479
N
F775_02480
Aegilops tauschii
F775_02480
N
F775_03183
Aegilops tauschii
F775_03183
N
F775_04232
Aegilops tauschii
F775_04232
N
F775_04954
Aegilops tauschii
F775_04954
N
F775_31089
Aegilops tauschii
F775_31089
N
GRMZM2G030272
Zea mays
GRMZM2G030272
N
GRMZM2G169564
Zea mays
GRMZM2G169564
N
GRMZM2G400559
Zea mays
GRMZM2G400559
N
LPERR03G13630
Leersia perrieri
LPERR03G13630
N
LPERR11G00970
Leersia perrieri
LPERR11G00970
N
LPERR12G01080
Leersia perrieri
LPERR12G01080
N
MLOC_57764
Hordeum vulgare
MLOC_57764
N
OB03G25300
Oryza brachyantha
OB03G25300
N
OB11G10760
Oryza brachyantha
OB11G10760
N
OB12G11030
Oryza brachyantha
OB12G11030
N
OBART03G15470
Oryza barthii
OBART03G15470
N
OBART12G00850
Oryza barthii
OBART12G00850
N
OGLUM03G15660
Oryza glumaepatula
OGLUM03G15660
N
OLONG_001744
Oryza longistaminata
OLONG_001744
N
OMERI11G01520
Oryza meridionalis
OMERI11G01520
N
OMERI11G01570
Oryza meridionalis
OMERI11G01570
N
ONIVA03G16490
Oryza nivara
ONIVA03G16490
N
OPUNC03G15030
Oryza punctata
OPUNC03G15030
N
OPUNC11G00980
Oryza punctata
OPUNC11G00980
N
OPUNC12G00990
Oryza punctata
OPUNC12G00990
N
ORGLA03G0148400
Oryza glaberrima
ORGLA03G0148400
N
ORGLA12G0007500
Oryza glaberrima
ORGLA12G0007500
N
ORGLA12G0007600
Oryza glaberrima
ORGLA12G0007600
N
ORUFI03G16080
Oryza rufipogon
ORUFI03G16080
N
OS03G0321700
Oryza sativa
OS03G0321700
N
OS11G0117500
Oryza sativa
OS11G0117500
N
OS12G0116700
Oryza sativa
OS12G0116700
N
Sb01g036870
Sorghum bicolor
Sb01g036870
N
Sb05g001220
Sorghum bicolor
Sb05g001220
N
Sb08g002560
Sorghum bicolor
Sb08g002560
N
Si010764m.g
Setaria italica
Si010764m.g
N
Si019098m.g
Setaria italica
Si019098m.g
N
Si027876m.g
Setaria italica
Si027876m.g
N
Si039519m.g
Setaria italica
Si039519m.g
N
Traes_4AS_70DF607CC
Triticum aestivum
Traes_4AS_70DF607CC
N
Traes_4BL_A8C6FBEB6
Triticum aestivum
Traes_4BL_A8C6FBEB6
N
Traes_4DL_3140A8240
Triticum aestivum
Traes_4DL_3140A8240
N
Traes_5AL_69A969FF4
Triticum aestivum
Traes_5AL_69A969FF4
N
TRIUR3_01445
Triticum urartu
TRIUR3_01445
N
TRIUR3_01447
Triticum urartu
TRIUR3_01447
N
TRIUR3_06231
Triticum urartu
TRIUR3_06231
N
TRIUR3_16097
Triticum urartu
TRIUR3_16097
N
TRIUR3_20905
Triticum urartu
TRIUR3_20905
N
TRIUR3_26571
Triticum urartu
TRIUR3_26571
N
TRIUR3_31234
Triticum urartu
TRIUR3_31234
N
Pavir.Ca00084
Panicum virgatum
Pavir.Ca00084
N
Pavir.Ib01500
Panicum virgatum
Pavir.Ib01500
N
Pavir.J09582
Panicum virgatum
Pavir.J09582
N
Pavir.J34713
Panicum virgatum
Pavir.J34713
N