SKUD_176205 (Saccharomyces kudriavzevii)
VHR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04001 (Vhr1) IPR007147 SKUD_176205 T350437_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VHR2
M00917_2.00 		Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN		 PBM
Gordan et al.(2011)
Vhr2 		0.923 0.923
VHR1
M08640_2.00 		Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA		 Misc
DeBoer et al.(2011)
YIL056W_1325 		0.791 0.791
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EJT42665 VHR1 22 112

Links

Other VHR1 family TFs
Other Saccharomyces kudriavzevii TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSXMAG00000002547 Xiphophorus maculatus ENSXMAG00000002547 N 0.000
NV14899 Nasonia vitripennis NV14899 N 0.000
NEMVEDRAFT_v1g66221 Nematostella vectensis NEMVEDRAFT_v1g66221 N 0.000
MESCA000924 Megaselia scalaris MESCA000924 N 0.000
LotgiG130257 Lottia gigantea LotgiG130257 N 0.000
L798_05013 Zootermopsis nevadensis L798_05013 N 0.000
HelroG144862 Helobdella robusta HelroG144862 N 0.000
GB51085 Apis mellifera GB51085 N 0.000
GL15563 Drosophila persimilis FBgn0153167 N 0.000
GF23530 Drosophila ananassae FBgn0100524 N 0.000
GA12179 Drosophila pseudoobscura FBgn0072227 N 0.000
PHUM605290 Pediculus humanus PHUM605290 N 0.000
PRDM13 Tursiops truncatus ENSTTRG00000004705 N 0.000
prdm13 Takifugu rubripes ENSTRUG00000000334 N 0.000
prdm13 Tetraodon nigroviridis ENSTNIG00000006867 N 0.000
ENSSTOG00000016567 Ictidomys tridecemlineatus ENSSTOG00000016567 N 0.000
PRDM13 Sus scrofa ENSSSCG00000004354 N 0.000
ENSSHAG00000013340 Sarcophilus harrisii ENSSHAG00000013340 N 0.000
Prdm13 Rattus norvegicus ENSRNOG00000007683 N 0.000
PRDM13 Pteropus vampyrus ENSPVAG00000001695 N 0.000
PRDM13 Pan troglodytes ENSPTRG00000018445 N 0.000
ENSP00000352819 Macaca fascicularis ENSP00000352819 N 0.000
TMUE_s0005011900 Trichuris muris TMUE_s0005011900 N 0.000
BGLB013051 Biomphalaria glabrata BGLB013051 N 0.000
XP_002158638.1 Hydra magnipapillata XP_002158638.1 N 0.000
prdm13 Xenopus tropicalis XB-GENE-960155 N 0.000
SMU15022318 Schmidtea mediterranea SMU15022318 N 0.000
HHAL009600-PA Halyomorpha halys HHAL009600-PA N 0.000
Sakowv30027334m.g Saccoglossus kowalevskii Sakowv30027334m.g N 0.000
Ocbimv22009191m.g Octopus bimaculoides Ocbimv22009191m.g N 0.000
gw.79.7.1 Branchiostoma floridae gw.79.7.1 N 0.000
Ogr12758 Ophisaurus gracilis Ogr12758 N 0.000
ENSPSIG00000002567 Pelodiscus sinensis ENSPSIG00000002567 N 0.000
ENSP00000352819-D1 Bos grunniens ENSP00000352819-D1 N 0.000
Cmyd_10002903 Chelonia mydas Cmyd_10002903 N 0.000
Alligator_sinensis_CCG004871.1 Alligator sinensis Alligator_sinensis_CCG004871.1 N 0.000
YQE_11778 Dendroctonus ponderosae YQE_11778 N 0.000
tetur10g01540 Tetranychus urticae tetur10g01540 N 0.000
SPU_012050 Strongylocentrotus purpuratus SPU_012050 N 0.000
SMAR010327 Strigamia maritima SMAR010327 N 0.000
SMAR008272 Strigamia maritima SMAR008272 N 0.000
RPRC014451 Rhodnius prolixus RPRC014451 N 0.000
PRDM13 Bos taurus ENSBTAG00000006095 N 0.000
PRDM13 Homo sapiens ENSG00000112238 N 0.000
PRDM13 Felis catus ENSFCAG00000010288 N 0.000
PRDM13 Echinops telfairi ENSETEG00000004709 N 0.000
ENSDORG00000003558 Dipodomys ordii ENSDORG00000003558 N 0.000
PRDM13 Dasypus novemcinctus ENSDNOG00000006520 N 0.000
prdm13 Danio rerio ENSDARG00000078701 N 0.000
ENSCSAG00000014622 Chlorocebus sabaeus ENSCSAG00000014622 N 0.000
PRDM13 Callithrix jacchus ENSCJAG00000001421 N 0.000
PRDM13 Choloepus hoffmanni ENSCHOG00000011613 N 0.000
PRDM13 Canis familiaris ENSCAFG00000023314 N 0.000
prdm13 Gasterosteus aculeatus ENSGACG00000005032 N 0.000
ENSAPLG00000007652 Anas platyrhynchos ENSAPLG00000007652 N 0.000
ENSAMXG00000008885 Astyanax mexicanus ENSAMXG00000008885 N 0.000
ENSAMEG00000008949 Ailuropoda melanoleuca ENSAMEG00000008949 N 0.000
DAPPUDRAFT_111472 Daphnia pulex DAPPUDRAFT_111472 N 0.000
CPIJ016312 Culex quinquefasciatus CPIJ016312 N 0.000
CGI_10026455 Crassostrea gigas CGI_10026455 N 0.000
CapteG164570 Capitella teleta CapteG164570 N 0.000
ACEP23774 Atta cephalotes ACEP23774 N 0.000
AAEL001736 Aedes aegypti AAEL001736 N 0.000
Prdm13 Mus musculus ENSMUSG00000040478 N 0.000
ENSPPYG00000016866 Pongo abelii ENSPPYG00000016866 N 0.000
ENSPFOG00000019371 Poecilia formosa ENSPFOG00000019371 N 0.000
ENSPANG00000017638 Papio anubis ENSPANG00000017638 N 0.000
prdm13 Oryzias latipes ENSORLG00000002129 N 0.000
ENSONIG00000000112 Oreochromis niloticus ENSONIG00000000112 N 0.000
PRDM13 Otolemur garnettii ENSOGAG00000031927 N 0.000
PRDM13 Oryctolagus cuniculus ENSOCUG00000003216 N 0.000
ENSOARG00000011775 Ovis aries ENSOARG00000011775 N 0.000
ENSNLEG00000013845 Nomascus leucogenys ENSNLEG00000013845 N 0.000
CpipJ_CPIJ016312 Culex pipiens CpipJ_CPIJ016312 N 0.000
ENSMPUG00000001648 Mustela putorius furo ENSMPUG00000001648 N 0.000
PRDM13 Monodelphis domestica ENSMODG00000018089 N 0.000
PRDM13 Myotis lucifugus ENSMLUG00000001899 N 0.000
ENSMICG00000001097 Microcebus murinus ENSMICG00000001097 N 0.000
ENSLOCG00000017084 Lepisosteus oculatus ENSLOCG00000017084 N 0.000
PRDM13 Loxodonta africana ENSLAFG00000012439 N 0.000
ENSLACG00000008814 Latimeria chalumnae ENSLACG00000008814 N 0.000
ENSGMOG00000006125 Gadus morhua ENSGMOG00000006125 N 0.000
PRDM13 Gorilla gorilla ENSGGOG00000006947 N 0.000