CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo1g024150
(
Brassica oleracea
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
Bo1g024150
T350721_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo1g024150.1
WRC
8
50
PDEFRCNRSDGKQWRCKRRALEGKKLCETHTSQLTQKRDREKA
Links
Other
WRC
family TFs
Other
Brassica oleracea
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RKD2
Arabidopsis thaliana
AT1G74480
D
Carubv10011133m.g
Capsella rubella
Carubv10011133m.g
I
AMTR_s00057p00091350
Amborella trichopoda
AMTR_s00057p00091350
I
VIT_17s0000g06250
Vitis vinifera
VIT_17s0000g06250
I
Ca_13151
Cicer arietinum
Ca_13151
I
Ca_27191
Cicer arietinum
Ca_27191
I
Cla019404
Citrullus lanatus
Cla019404
I
Pm024905
Prunus mume
Pm024905
I
30138.m004071
Ricinus communis
30138.m004071
I
cassava35166.m1
Manihot esculenta
cassava35166.m1
I
mg020279m
Mimulus guttatus
mg020279m
I
mgf022310m
Mimulus guttatus
mgf022310m
I
Bostr.3288s0094
Boechera stricta
Bostr.3288s0094
I
Cagra.0402s0077
Capsella grandiflora
Cagra.0402s0077
I
Cagra.4153s0001
Capsella grandiflora
Cagra.4153s0001
I
TRIUR3_19503
Triticum urartu
TRIUR3_19503
I
Carubv10021541m.g
Capsella rubella
Carubv10021541m.g
I
evm.TU.supercontig_423.7
Carica papaya
evm.TU.supercontig_423.7
I
gene26015-v1.0-hybrid
Fragaria vesca
gene26015-v1.0-hybrid
I
Gorai.006G266900
Gossypium raimondii
Gorai.006G266900
I
Gorai.008G193400
Gossypium raimondii
Gorai.008G193400
I
Lus10034456.g
Linum usitatissimum
Lus10034456.g
I
MDP0000261199
Malus domestica
MDP0000261199
I
MDP0000266172
Malus domestica
MDP0000266172
I
orange1.1g036926m.g
Citrus sinensis
orange1.1g036926m.g
I
Thhalv10019554m.g
Eutrema salsugineum
Thhalv10019554m.g
I
chr4.CM0087.990.nc
Lotus japonicus
chr4.CM0087.990.nc
I
GLYMA04G33516
Glycine max
GLYMA04G33516
I
RKD1
Arabidopsis thaliana
AT1G18790
I
Bo7g064180
Brassica oleracea
Bo7g064180
I
Bo8g068090
Brassica oleracea
Bo8g068090
I
Bra008153
Brassica rapa
Bra008153
I
Bra012122
Brassica rapa
Bra012122
I
Bra015907
Brassica rapa
Bra015907
I
Bra016542
Brassica rapa
Bra016542
I
fgenesh1_pg.C_scaffold_2000886
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000886
I
fgenesh1_pg.C_scaffold_2001738
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001738
I
fgenesh1_pg.C_scaffold_8002648
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002648
I
fgenesh2_kg.1__2057__AT1G18790.1
Arabidopsis lyrata
fgenesh2_kg.1__2057__AT1G18790.1
I
TCM_014009
Theobroma cacao
TCM_014009
I
GLYMA05G01030
Glycine max
GLYMA05G01030
I
GLYMA06G20881
Glycine max
GLYMA06G20881
I
GLYMA17G10866
Glycine max
GLYMA17G10866
I
GRMZM2G392306
Zea mays
GRMZM2G392306
I
MLOC_12609
Hordeum vulgare
MLOC_12609
I
MLOC_59560
Hordeum vulgare
MLOC_59560
I
MTR_3g435550
Medicago truncatula
MTR_3g435550
I
PRUPE_ppa023107mg
Prunus persica
PRUPE_ppa023107mg
I
scaffold_103100001.1
Arabidopsis lyrata
scaffold_103100001.1
I
Si020172m.g
Setaria italica
Si020172m.g
I
Solyc03g116010.1
Solanum lycopersicum
Solyc03g116010.1
I
Bostr.0568s0123
Boechera stricta
Bostr.0568s0123
N
Thhalv10005560m.g
Eutrema salsugineum
Thhalv10005560m.g
N
RKD3
Arabidopsis thaliana
AT5G66990
N