CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10004087m.g
(
Capsella rubella
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08879 (WRC)
IPR014977
Carubv10004087m.g
T351567_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10004087m
WRC
8
50
PDEFRCNRSDGKQWRCKKRALEGKKMCEGHYSQQNRKRSTQKG
Links
Other
WRC
family TFs
Other
Capsella rubella
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
B160
Arabidopsis thaliana
AT4G21430
N
0.837
Bo1g024150
Brassica oleracea
Bo1g024150
N
0.744
Bo7g107410
Brassica oleracea
Bo7g107410
N
0.791
Bra013525
Brassica rapa
Bra013525
N
0.744
Bra038775
Brassica rapa
Bra038775
N
0.814
B160
Arabidopsis lyrata
scaffold_702276.1
N
0.814
Bostr.10689s0088
Boechera stricta
Bostr.10689s0088
N
0.814
Cagra.2455s0005
Capsella grandiflora
Cagra.2455s0005
N
1.000
Thhalv10024332m.g
Eutrema salsugineum
Thhalv10024332m.g
N
0.767