Bra008454 (Brassica rapa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 Bra008454 T352252_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.842 0.746
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.840 0.661
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.835 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008454.1-P WRKY 43 103

Links

Other WRKY family TFs
Other Brassica rapa TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY63 Arabidopsis thaliana AT1G66600 D 0.842
WRKY62 Arabidopsis thaliana AT5G01900 D 0.835
WRKY38 Arabidopsis thaliana AT5G22570 D 0.840
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.857
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.844
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.840
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.827
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.848
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.840
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.824
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.823
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.840
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.820
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.810
TRIUR3_33054 Triticum urartu TRIUR3_33054 I 0.808
TCM_045555 Theobroma cacao TCM_045555 I 0.809
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.840
OS05G0478400 Oryza sativa OS05G0478400 I 0.810
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.841
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.824
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.813
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.820
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.844
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.841
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.851
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.849
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.853
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.824
MDP0000828055 Malus domestica MDP0000828055 I 0.810
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.876
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.839
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.832
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.870
Bra023211 Brassica rapa Bra023211 I 0.833
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.835
WRKY67 Arabidopsis thaliana AT1G66550 I 0.853
WRKY64 Arabidopsis thaliana AT1G66560 I 0.847
WRKY66 Arabidopsis thaliana AT1G80590 I 0.842
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.810
Bo01002s040 Brassica oleracea Bo01002s040 I 0.816
Bo2g024040 Brassica oleracea Bo2g024040 I 0.826
Bo2g095820 Brassica oleracea Bo2g095820 I 0.879
Bo5g068250 Brassica oleracea Bo5g068250 I 0.833
Bra002421 Brassica rapa Bra002421 I 0.816
Bra008456 Brassica rapa Bra008456 I 0.847
Bra008459 Brassica rapa Bra008459 I 0.879
Bra020196 Brassica rapa Bra020196 I 0.824
Bra020197 Brassica rapa Bra020197 I 0.826
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.810
Bra028918 Brassica rapa Bra028918 I 0.840
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.853
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.810
MLOC_22356 Hordeum vulgare MLOC_22356 I 0.809
MTR_5g067680 Medicago truncatula MTR_5g067680 I 0.810
OBART05G20340 Oryza barthii OBART05G20340 I 0.809
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.810
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.809
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.810
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.809
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.810
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.852
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.810
MLOC_3853 Hordeum vulgare MLOC_3853 N 0.810