CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G30695
(
Brachypodium distachyon
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
BRADI2G30695
T352402_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY46
M07395_2.00
Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB
Dap-seq
OMalley et al.(2016)
WRKY46_col_a
0.816
0.600
WRKY46
M07396_2.00
Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD
Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a
0.816
0.600
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G30695.1
WRKY
108
171
DDGQAWRKYGQKYIHNSKHPRAYFRCTHKYDQQCAAQRQVQRCEDDDDDKDTFRVTYIGVHTCR
Links
Other
WRKY
family TFs
Other
Brachypodium distachyon
TFs
97 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WRKY46
Arabidopsis thaliana
AT2G46400
D
0.816
Cagra.0050s0059
Capsella grandiflora
Cagra.0050s0059
I
0.818
Cagra.0483s0080
Capsella grandiflora
Cagra.0483s0080
I
0.830
Bostr.25993s0129
Boechera stricta
Bostr.25993s0129
I
0.814
Bostr.13158s0168
Boechera stricta
Bostr.13158s0168
I
0.810
Cucsa.143830
Cucumis sativus
Cucsa.143830
I
0.808
cassava7525.valid.m1
Manihot esculenta
cassava7525.valid.m1
I
0.818
cassava7524.valid.m1
Manihot esculenta
cassava7524.valid.m1
I
0.818
cassava36286.valid.m1
Manihot esculenta
cassava36286.valid.m1
I
0.810
cassava23183.valid.m1
Manihot esculenta
cassava23183.valid.m1
I
0.819
29915.m000479
Ricinus communis
29915.m000479
I
0.809
29729.m002369
Ricinus communis
29729.m002369
I
0.809
Pm003015
Prunus mume
Pm003015
I
0.817
Pm003013
Prunus mume
Pm003013
I
0.832
TRIUR3_22128
Triticum urartu
TRIUR3_22128
I
0.809
TRIUR3_04352
Triticum urartu
TRIUR3_04352
I
0.875
Traes_7DL_A9EF00572
Triticum aestivum
Traes_7DL_A9EF00572
I
0.877
Traes_7BL_53AA25AA1
Triticum aestivum
Traes_7BL_53AA25AA1
I
0.846
Traes_4AS_0DA136E0E
Triticum aestivum
Traes_4AS_0DA136E0E
I
0.814
TCM_045556
Theobroma cacao
TCM_045556
I
0.819
Solyc09g015770.2
Solanum lycopersicum
Solyc09g015770.2
I
0.813
Si036565m.g
Setaria italica
Si036565m.g
I
0.818
Si022702m.g
Setaria italica
Si022702m.g
I
0.873
Sb08g005080
Sorghum bicolor
Sb08g005080
I
0.839
Gorai.013G008300
Gossypium raimondii
Gorai.013G008300
I
0.823
PDK_20s1440981g001
Phoenix dactylifera
PDK_20s1440981g001
I
0.816
PK21378.1
Cannabis sativa
PK21378.1
I
0.809
PK03324.1
Cannabis sativa
PK03324.1
I
0.809
SapurV1A.0914s0120
Salix purpurea
SapurV1A.0914s0120
I
0.813
SapurV1A.0356s0010
Salix purpurea
SapurV1A.0356s0010
I
0.813
SapurV1A.0065s0580
Salix purpurea
SapurV1A.0065s0580
I
0.813
Pavir.Cb01173
Panicum virgatum
Pavir.Cb01173
I
0.873
Pavir.Ca02012
Panicum virgatum
Pavir.Ca02012
I
0.870
orange1.1g021598m.g
Citrus sinensis
orange1.1g021598m.g
I
0.821
MDP0000754989
Malus domestica
MDP0000754989
I
0.835
MDP0000578301
Malus domestica
MDP0000578301
I
0.814
Sb01g036180
Sorghum bicolor
Sb01g036180
I
0.815
Gorai.012G013900
Gossypium raimondii
Gorai.012G013900
I
0.820
Gorai.010G219200
Gossypium raimondii
Gorai.010G219200
I
0.824
Gorai.009G292600
Gossypium raimondii
Gorai.009G292600
I
0.822
gene21365-v1.0-hybrid
Fragaria vesca
gene21365-v1.0-hybrid
I
0.808
gene13554-v1.0-hybrid
Fragaria vesca
gene13554-v1.0-hybrid
I
0.821
gene13549-v1.0-hybrid
Fragaria vesca
gene13549-v1.0-hybrid
I
0.821
gene13546-v1.0-hybrid
Fragaria vesca
gene13546-v1.0-hybrid
I
0.812
Eucgr.J00106
Eucalyptus grandis
Eucgr.J00106
I
0.838
Ciclev10032192m.g
Citrus clementina
Ciclev10032192m.g
I
0.821
Carubv10023578m.g
Capsella rubella
Carubv10023578m.g
I
0.818
Carubv10019489m.g
Capsella rubella
Carubv10019489m.g
I
0.809
F775_21933
Aegilops tauschii
F775_21933
I
0.816
OB03G26140
Oryza brachyantha
OB03G26140
I
0.824
MLOC_66134
Hordeum vulgare
MLOC_66134
I
0.871
MLOC_5971
Hordeum vulgare
MLOC_5971
I
0.811
LPERR05G09130
Leersia perrieri
LPERR05G09130
I
0.863
LPERR03G14340
Leersia perrieri
LPERR03G14340
I
0.812
GSMUA_Achr5G07490_001
Musa acuminata
GSMUA_Achr5G07490_001
I
0.826
GRMZM2G004060
Zea mays
GRMZM2G004060
I
0.831
GLYMA14G36438
Glycine max
GLYMA14G36438
I
0.810
GLYMA14G36430
Glycine max
GLYMA14G36430
I
0.812
WRKY46
Arabidopsis lyrata
fgenesh2_kg.4__2854__AT2G46400.1
I
0.812
fgenesh1_pm.C_scaffold_5002145
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5002145
I
0.811
F775_32858
Aegilops tauschii
F775_32858
I
0.865
PRUPE_ppa025912mg
Prunus persica
PRUPE_ppa025912mg
I
0.821
F775_07845
Aegilops tauschii
F775_07845
I
0.810
F775_07376
Aegilops tauschii
F775_07376
I
0.814
BRADI2G44270
Brachypodium distachyon
BRADI2G44270
I
0.847
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.821
BRADI1G17660
Brachypodium distachyon
BRADI1G17660
I
0.821
Bra004540
Brassica rapa
Bra004540
I
0.815
Bra000423
Brassica rapa
Bra000423
I
0.819
Bo4g009270
Brassica oleracea
Bo4g009270
I
0.815
Bo3g039240
Brassica oleracea
Bo3g039240
I
0.819
BGIOSGA019621
Oryza indica
BGIOSGA019621
I
0.862
BGIOSGA012571
Oryza indica
BGIOSGA012571
I
0.817
ORGLA05G0099400
Oryza glaberrima
ORGLA05G0099400
I
0.862
PRUPE_ppa026704mg
Prunus persica
PRUPE_ppa026704mg
I
0.830
POPTR_0016s14490
Populus trichocarpa
POPTR_0016s14490
I
0.811
POPTR_0013s09470
Populus trichocarpa
POPTR_0013s09470
I
0.809
PGSC0003DMG400029207
Solanum tuberosum
PGSC0003DMG400029207
I
0.813
PGSC0003DMG400027582
Solanum tuberosum
PGSC0003DMG400027582
I
0.808
OS05G0322900
Oryza sativa
OS05G0322900
I
0.862
OS03G0335200
Oryza sativa
OS03G0335200
I
0.817
ORUFI05G12710
Oryza rufipogon
ORUFI05G12710
I
0.862
ORUFI03G16960
Oryza rufipogon
ORUFI03G16960
I
0.817
OPUNC05G10020
Oryza punctata
OPUNC05G10020
I
0.862
ONIVA05G12100
Oryza nivara
ONIVA05G12100
I
0.862
ONIVA03G17390
Oryza nivara
ONIVA03G17390
I
0.817
OMERI05G10380
Oryza meridionalis
OMERI05G10380
I
0.862
OMERI03G14670
Oryza meridionalis
OMERI03G14670
I
0.817
OLONG_024544
Oryza longistaminata
OLONG_024544
I
0.817
OGLUM05G12430
Oryza glumaepatula
OGLUM05G12430
I
0.862
OGLUM03G16780
Oryza glumaepatula
OGLUM03G16780
I
0.817
OBART05G11710
Oryza barthii
OBART05G11710
I
0.862
OBART03G16400
Oryza barthii
OBART03G16400
I
0.817
OB05G20210
Oryza brachyantha
OB05G20210
N
0.834
TRIUR3_21738
Triticum urartu
TRIUR3_21738
N
0.818
Traes_2DL_362A1F535
Triticum aestivum
Traes_2DL_362A1F535
N
0.827
OLONG_021882
Oryza longistaminata
OLONG_021882
N
0.838