CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA13G34251
(
Glycine max
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
GLYMA13G34251
T352722_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.808
0.610
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA13G34251.1
WRKY
134
194
EDGYVWRKYGQKMTLNAKYLRSYYRCSHKNDQGCQAMKQVQRIQDNPPLYRTTYYGHHTCR
Links
Other
WRKY
family TFs
Other
Glycine max
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WRKY38
Arabidopsis thaliana
AT5G22570
D
0.808
VIT_08s0058g01390
Vitis vinifera
VIT_08s0058g01390
I
0.819
PK03324.1
Cannabis sativa
PK03324.1
I
0.809
VIT_13s0067g03140
Vitis vinifera
VIT_13s0067g03140
I
0.810
Ca_09495
Cicer arietinum
Ca_09495
I
0.811
Ca_12915
Cicer arietinum
Ca_12915
I
0.826
Ca_18932
Cicer arietinum
Ca_18932
I
0.811
Cla018337
Citrullus lanatus
Cla018337
I
0.823
Pm003014
Prunus mume
Pm003014
I
0.810
Pm003015
Prunus mume
Pm003015
I
0.817
29729.m002369
Ricinus communis
29729.m002369
I
0.809
29915.m000479
Ricinus communis
29915.m000479
I
0.813
cassava25180.valid.m1
Manihot esculenta
cassava25180.valid.m1
I
0.819
cassava36286.valid.m1
Manihot esculenta
cassava36286.valid.m1
I
0.824
cassava43790.valid.m1
Manihot esculenta
cassava43790.valid.m1
I
0.818
cassava7524.valid.m1
Manihot esculenta
cassava7524.valid.m1
I
0.815
cassava7525.valid.m1
Manihot esculenta
cassava7525.valid.m1
I
0.815
Cucsa.177060
Cucumis sativus
Cucsa.177060
I
0.819
Ciclev10012055m.g
Citrus clementina
Ciclev10012055m.g
I
0.814
Ciclev10033384m.g
Citrus clementina
Ciclev10033384m.g
I
0.809
evm.TU.supercontig_86.64
Carica papaya
evm.TU.supercontig_86.64
I
0.815
evm.TU.supercontig_86.65
Carica papaya
evm.TU.supercontig_86.65
I
0.824
Gorai.005G003900
Gossypium raimondii
Gorai.005G003900
I
0.826
Lus10025216.g
Linum usitatissimum
Lus10025216.g
I
0.815
orange1.1g018407m.g
Citrus sinensis
orange1.1g018407m.g
I
0.809
orange1.1g020291m.g
Citrus sinensis
orange1.1g020291m.g
I
0.814
SapurV1A.0065s0580
Salix purpurea
SapurV1A.0065s0580
I
0.823
SapurV1A.0356s0010
Salix purpurea
SapurV1A.0356s0010
I
0.814
SapurV1A.0914s0120
Salix purpurea
SapurV1A.0914s0120
I
0.814
AMTR_s00077p00103580
Amborella trichopoda
AMTR_s00077p00103580
I
0.814
MTR_2g075700
Medicago truncatula
MTR_2g075700
I
0.828
Bo01002s040
Brassica oleracea
Bo01002s040
I
0.812
Bra002421
Brassica rapa
Bra002421
I
0.812
F775_02122
Aegilops tauschii
F775_02122
I
0.808
GLYMA03G00460
Glycine max
GLYMA03G00460
I
0.818
GLYMA09G41050
Glycine max
GLYMA09G41050
I
0.813
GLYMA13G34240
Glycine max
GLYMA13G34240
I
0.870
GLYMA13G34261
Glycine max
GLYMA13G34261
I
0.879
GLYMA13G34281
Glycine max
GLYMA13G34281
I
0.862
GLYMA16G34590
Glycine max
GLYMA16G34590
I
0.822
MTR_0002s1250
Medicago truncatula
MTR_0002s1250
I
0.812
MTR_2g075610
Medicago truncatula
MTR_2g075610
I
0.841
MTR_2g075680
Medicago truncatula
MTR_2g075680
I
0.841
MTR_2g075690
Medicago truncatula
MTR_2g075690
I
0.843
TCM_019689
Theobroma cacao
TCM_019689
I
0.833
MTR_2g075750
Medicago truncatula
MTR_2g075750
I
0.841
MTR_7g073380
Medicago truncatula
MTR_7g073380
I
0.823
MTR_7g073430
Medicago truncatula
MTR_7g073430
I
0.827
MTR_8g005750
Medicago truncatula
MTR_8g005750
I
0.820
PGSC0003DMG400008391
Solanum tuberosum
PGSC0003DMG400008391
I
0.821
PGSC0003DMG400027582
Solanum tuberosum
PGSC0003DMG400027582
I
0.814
PGSC0003DMG400029207
Solanum tuberosum
PGSC0003DMG400029207
I
0.818
POPTR_0006s10950
Populus trichocarpa
POPTR_0006s10950
I
0.823
POPTR_0016s14490
Populus trichocarpa
POPTR_0016s14490
I
0.830
PRUPE_ppa020736mg
Prunus persica
PRUPE_ppa020736mg
I
0.810
PRUPE_ppa025912mg
Prunus persica
PRUPE_ppa025912mg
I
0.815
WRKY38
Arabidopsis lyrata
scaffold_602308.1
I
0.808
Solyc09g015770.2
Solanum lycopersicum
Solyc09g015770.2
I
0.818