PGSC0003DMG400008391 (Solanum tuberosum)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 PGSC0003DMG400008391 T354250_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.828 0.627
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.813 0.542
WRKY55
M07392_2.00 		Arabidopsis thaliana
HWAGTCAACGNH
DNCGTTGACTWD		 Dap-seq
OMalley et al.(2016)
WRKY55_col_a 		0.808 0.576
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400021625 WRKY 105 165

Links

Other WRKY family TFs
Other Solanum tuberosum TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY55 Arabidopsis thaliana AT2G40740 D 0.808
WRKY70 Arabidopsis thaliana AT3G56400 D 0.828
WRKY38 Arabidopsis thaliana AT5G22570 D 0.813
Al_scaffold_0004_2305 Arabidopsis lyrata Al_scaffold_0004_2305 I 0.811
AMTR_s00077p00103580 Amborella trichopoda AMTR_s00077p00103580 I 0.814
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.818
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.817
BGIOSGA019620 Oryza indica BGIOSGA019620 I 0.809
BGIOSGA019621 Oryza indica BGIOSGA019621 I 0.815
Bo00913s010 Brassica oleracea Bo00913s010 I 0.816
Bo01002s040 Brassica oleracea Bo01002s040 I 0.828
Bo2g024040 Brassica oleracea Bo2g024040 I 0.810
Bo3g035130 Brassica oleracea Bo3g035130 I 0.811
Bo3g035140 Brassica oleracea Bo3g035140 I 0.823
Bo4g012750 Brassica oleracea Bo4g012750 I 0.825
Bo4g190380 Brassica oleracea Bo4g190380 I 0.810
Bo4g190390 Brassica oleracea Bo4g190390 I 0.825
Bo6g066790 Brassica oleracea Bo6g066790 I 0.814
Bo6g071110 Brassica oleracea Bo6g071110 I 0.826
Bo8g090820 Brassica oleracea Bo8g090820 I 0.828
Bra000202 Brassica rapa Bra000202 I 0.811
Bra000203 Brassica rapa Bra000203 I 0.823
Bra002421 Brassica rapa Bra002421 I 0.828
Bra003239 Brassica rapa Bra003239 I 0.827
Bra004586 Brassica rapa Bra004586 I 0.823
Bra007243 Brassica rapa Bra007243 I 0.825
Bra014692 Brassica rapa Bra014692 I 0.816
Bra016974 Brassica rapa Bra016974 I 0.825
Bra016975 Brassica rapa Bra016975 I 0.812
Bra020196 Brassica rapa Bra020196 I 0.812
Bra020197 Brassica rapa Bra020197 I 0.810
Bra028918 Brassica rapa Bra028918 I 0.809
BRADI1G63220 Brachypodium distachyon BRADI1G63220 I 0.812
BRADI2G30800 Brachypodium distachyon BRADI2G30800 I 0.809
F775_02122 Aegilops tauschii F775_02122 I 0.811
F775_07376 Aegilops tauschii F775_07376 I 0.813
WRKY55 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001817 I 0.809
fgenesh1_pm.C_scaffold_4001818 Arabidopsis lyrata fgenesh1_pm.C_scaffold_4001818 I 0.811
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.829
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.840
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.818
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.842
GLYMA05G29921 Glycine max GLYMA05G29921 I 0.820
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.842
GLYMA06G14731 Glycine max GLYMA06G14731 I 0.808
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.859
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.831
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.821
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.814
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.820
GLYMA14G36430 Glycine max GLYMA14G36430 I 0.826
GLYMA14G36438 Glycine max GLYMA14G36438 I 0.814
GLYMA14G36446 Glycine max GLYMA14G36446 I 0.822
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.847
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.841
GRMZM2G025895 Zea mays GRMZM2G025895 I 0.812
GRMZM2G061408 Zea mays GRMZM2G061408 I 0.812
GSMUA_Achr6G05710_001 Musa acuminata GSMUA_Achr6G05710_001 I 0.813
GSMUA_Achr8G01730_001 Musa acuminata GSMUA_Achr8G01730_001 I 0.814
GSMUA_Achr9G04830_001 Musa acuminata GSMUA_Achr9G04830_001 I 0.812
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.822
LPERR05G09130 Leersia perrieri LPERR05G09130 I 0.810
LPERR05G09170 Leersia perrieri LPERR05G09170 I 0.809
LPERR08G11030 Leersia perrieri LPERR08G11030 I 0.812
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.846
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.839
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.839
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.842
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.838
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.839
MTR_3g093830 Medicago truncatula MTR_3g093830 I 0.830
MTR_5g067700 Medicago truncatula MTR_5g067700 I 0.821
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.858
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.848
MTR_8g005750 Medicago truncatula MTR_8g005750 I 0.842
OB0086G10030 Oryza brachyantha OB0086G10030 I 0.809
OB03G26140 Oryza brachyantha OB03G26140 I 0.810
OBART03G16400 Oryza barthii OBART03G16400 I 0.817
OBART05G11690 Oryza barthii OBART05G11690 I 0.809
OBART05G11710 Oryza barthii OBART05G11710 I 0.814
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.817
OGLUM05G12420 Oryza glumaepatula OGLUM05G12420 I 0.809
OGLUM05G12430 Oryza glumaepatula OGLUM05G12430 I 0.814
OLONG_021880 Oryza longistaminata OLONG_021880 I 0.809
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.817
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.817
OMERI05G10350 Oryza meridionalis OMERI05G10350 I 0.809
OMERI05G10380 Oryza meridionalis OMERI05G10380 I 0.814
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.817
ONIVA05G12080 Oryza nivara ONIVA05G12080 I 0.809
ONIVA05G12100 Oryza nivara ONIVA05G12100 I 0.815
OPUNC05G10010 Oryza punctata OPUNC05G10010 I 0.809
OPUNC05G10020 Oryza punctata OPUNC05G10020 I 0.814
ORGLA05G0099300 Oryza glaberrima ORGLA05G0099300 I 0.809
ORGLA05G0099400 Oryza glaberrima ORGLA05G0099400 I 0.814
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.817
ORUFI05G12690 Oryza rufipogon ORUFI05G12690 I 0.809
ORUFI05G12710 Oryza rufipogon ORUFI05G12710 I 0.814
OS03G0335200 Oryza sativa OS03G0335200 I 0.817
OS05G0321900 Oryza sativa OS05G0321900 I 0.809
OS05G0322900 Oryza sativa OS05G0322900 I 0.814
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.831
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.842
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.866
POPTR_0002s17010 Populus trichocarpa POPTR_0002s17010 I 0.809
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.850
POPTR_0013s09470 Populus trichocarpa POPTR_0013s09470 I 0.826
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.863
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.849
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.845
PRUPE_ppa026125mg Prunus persica PRUPE_ppa026125mg I 0.823
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.841
Sb01g036180 Sorghum bicolor Sb01g036180 I 0.812
Sb08g005080 Sorghum bicolor Sb08g005080 I 0.818
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.813
Si022702m.g Setaria italica Si022702m.g I 0.817
Si025307m.g Setaria italica Si025307m.g I 0.809
Si030531m.g Setaria italica Si030531m.g I 0.813
Si036565m.g Setaria italica Si036565m.g I 0.818
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.830
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.866
TCM_006116 Theobroma cacao TCM_006116 I 0.812
TCM_019689 Theobroma cacao TCM_019689 I 0.849
TCM_045556 Theobroma cacao TCM_045556 I 0.820
Traes_3AL_6E92D4E1F Triticum aestivum Traes_3AL_6E92D4E1F I 0.809
TRIUR3_29889 Triticum urartu TRIUR3_29889 I 0.809
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.812
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.808
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.826
Ca_04100 Cicer arietinum Ca_04100 I 0.827
Ca_09495 Cicer arietinum Ca_09495 I 0.866
Ca_12915 Cicer arietinum Ca_12915 I 0.848
Ca_18932 Cicer arietinum Ca_18932 I 0.848
Ca_21669 Cicer arietinum Ca_21669 I 0.811
Cla007424 Citrullus lanatus Cla007424 I 0.811
Cla015244 Citrullus lanatus Cla015244 I 0.816
Cla018337 Citrullus lanatus Cla018337 I 0.861
Pm003013 Prunus mume Pm003013 I 0.843
Pm003014 Prunus mume Pm003014 I 0.849
Pm003015 Prunus mume Pm003015 I 0.851
Pm019286 Prunus mume Pm019286 I 0.829
29729.m002369 Ricinus communis 29729.m002369 I 0.848
29729.m002370 Ricinus communis 29729.m002370 I 0.810
29915.m000479 Ricinus communis 29915.m000479 I 0.856
cassava23183.valid.m1 Manihot esculenta cassava23183.valid.m1 I 0.831
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.861
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.866
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.845
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.845
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.845
Cucsa.078810 Cucumis sativus Cucsa.078810 I 0.817
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.850
mgf002542m Mimulus guttatus mgf002542m I 0.833
mgf009193m Mimulus guttatus mgf009193m I 0.854
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.847
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I 0.814
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.823
Bostr.9345s0060 Boechera stricta Bostr.9345s0060 I 0.810
Bostr.9345s0061 Boechera stricta Bostr.9345s0061 I 0.809
Cagra.0925s0056 Capsella grandiflora Cagra.0925s0056 I 0.822
Cagra.1642s0038 Capsella grandiflora Cagra.1642s0038 I 0.809
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.827
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.812
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.812
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.826
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.813
Carubv10023773m.g Capsella rubella Carubv10023773m.g I 0.809
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.827
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.857
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.837
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.823
Eucgr.G03144 Eucalyptus grandis Eucgr.G03144 I 0.815
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.826
Eucgr.J00106 Eucalyptus grandis Eucgr.J00106 I 0.821
Eucgr.J02653 Eucalyptus grandis Eucgr.J02653 I 0.808
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.837
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.826
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.835
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.834
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.844
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.842
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.842
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.839
gene21365-v1.0-hybrid Fragaria vesca gene21365-v1.0-hybrid I 0.817
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.843
Gorai.009G292600 Gossypium raimondii Gorai.009G292600 I 0.822
Gorai.010G219200 Gossypium raimondii Gorai.010G219200 I 0.819
Gorai.012G013900 Gossypium raimondii Gorai.012G013900 I 0.820
Gorai.013G008300 Gossypium raimondii Gorai.013G008300 I 0.829
Lus10012870.g Linum usitatissimum Lus10012870.g I 0.815
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.817
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.827
Lus10029021.g Linum usitatissimum Lus10029021.g I 0.827
Lus10029022.g Linum usitatissimum Lus10029022.g I 0.809
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.826
Lus10034244.g Linum usitatissimum Lus10034244.g I 0.825
MDP0000175240 Malus domestica MDP0000175240 I 0.823
MDP0000578301 Malus domestica MDP0000578301 I 0.812
MDP0000754989 Malus domestica MDP0000754989 I 0.832
MDP0000828055 Malus domestica MDP0000828055 I 0.809
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.823
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.857
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.837
Pavir.Ba02545 Panicum virgatum Pavir.Ba02545 I 0.809
Pavir.Bb02088 Panicum virgatum Pavir.Bb02088 I 0.809
Pavir.Ca01708 Panicum virgatum Pavir.Ca01708 I 0.809
Pavir.Ca02012 Panicum virgatum Pavir.Ca02012 I 0.816
Pavir.Cb01173 Panicum virgatum Pavir.Cb01173 I 0.817
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.818
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.818
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.859
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.851
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.851
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.826
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.809
Thhalv10016713m.g Eutrema salsugineum Thhalv10016713m.g I 0.817
Thhalv10017926m.g Eutrema salsugineum Thhalv10017926m.g I 0.810
PK03324.1 Cannabis sativa PK03324.1 I 0.841
PK10616.1 Cannabis sativa PK10616.1 I 0.816
PK21378.1 Cannabis sativa PK21378.1 I 0.832
chr1.CM0320.400.nd Lotus japonicus chr1.CM0320.400.nd I 0.830
PDK_20s1314561g002 Phoenix dactylifera PDK_20s1314561g002 I 0.809
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.834
PDK_20s1571901g001 Phoenix dactylifera PDK_20s1571901g001 I 0.823
MTR_8g032510 Medicago truncatula MTR_8g032510 N 0.837
OB11G10740 Oryza brachyantha OB11G10740 N 0.809
mgf016988m Mimulus guttatus mgf016988m N 0.810
mgf024512m Mimulus guttatus mgf024512m N 0.809