POPTR_0016s14490 (Populus trichocarpa)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 POPTR_0016s14490 T354414_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.836 0.627
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0016s14490.1 WRKY 130 190

Links

Other WRKY family TFs
Other Populus trichocarpa TFs

223 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra031242 Brassica rapa Bra031242 I
mgf012950m Mimulus guttatus mgf012950m I
VIT_13s0064g00860 Vitis vinifera VIT_13s0064g00860 I
TRIUR3_09920 Triticum urartu TRIUR3_09920 I
Traes_6DL_FD903DBD8 Triticum aestivum Traes_6DL_FD903DBD8 I
Traes_4DS_AFBE29C20 Triticum aestivum Traes_4DS_AFBE29C20 I
Traes_4BS_B7B7EFF37 Triticum aestivum Traes_4BS_B7B7EFF37 I
Traes_4AL_7C4C68FD0 Triticum aestivum Traes_4AL_7C4C68FD0 I
Solyc01g087240.2 Solanum lycopersicum Solyc01g087240.2 I
Gorai.004G066000 Gossypium raimondii Gorai.004G066000 I
Lus10011326.g Linum usitatissimum Lus10011326.g I
Lus10016411.g Linum usitatissimum Lus10016411.g I
Lus10019708.g Linum usitatissimum Lus10019708.g I
Lus10012202.g Linum usitatissimum Lus10012202.g I
Bo5g105110 Brassica oleracea Bo5g105110 I
BRADI1G11800 Brachypodium distachyon BRADI1G11800 I
PDK_20s1414531g001 Phoenix dactylifera PDK_20s1414531g001 N
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N
Bostr.15697s0348 Boechera stricta Bostr.15697s0348 N
Cagra.1508s0155 Capsella grandiflora Cagra.1508s0155 N
Carubv10010359m.g Capsella rubella Carubv10010359m.g N
Eucgr.A02381 Eucalyptus grandis Eucgr.A02381 N
LjSGA_013150.1 Lotus japonicus LjSGA_013150.1 N
MDP0000314593 Malus domestica MDP0000314593 N
MDP0000296077 Malus domestica MDP0000296077 N
Lus10038448.g Linum usitatissimum Lus10038448.g N
Lus10023358.g Linum usitatissimum Lus10023358.g N
Eucgr.J00764 Eucalyptus grandis Eucgr.J00764 N
PGSC0003DMG400008148 Solanum tuberosum PGSC0003DMG400008148 N
BRADI4G01820 Brachypodium distachyon BRADI4G01820 N
GLYMA09G02770 Glycine max GLYMA09G02770 N
GLYMA15G13660 Glycine max GLYMA15G13660 N
GSMUA_Achr4G03600_001 Musa acuminata GSMUA_Achr4G03600_001 N
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N
GSMUA_Achr9G10300_001 Musa acuminata GSMUA_Achr9G10300_001 N
MLOC_52315 Hordeum vulgare MLOC_52315 N
MLOC_5869 Hordeum vulgare MLOC_5869 N
MTR_2g030170 Medicago truncatula MTR_2g030170 N
mg014677m Mimulus guttatus mg014677m N
POPTR_0001s38100 Populus trichocarpa POPTR_0001s38100 N
PRUPE_ppa011627mg Prunus persica PRUPE_ppa011627mg N
Ca_07995 Cicer arietinum Ca_07995 N
Cla008690 Citrullus lanatus Cla008690 N
Pm010516 Prunus mume Pm010516 N
30075.m001182 Ricinus communis 30075.m001182 N
Cucsa.124180 Cucumis sativus Cucsa.124180 N
estExt_fgenesh1_pg.C_420118 Physcomitrella patens estExt_fgenesh1_pg.C_420118 N