CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ca_18932
(
Cicer arietinum
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03106 (WRKY)
IPR003657
Ca_18932
T355257_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN
NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.828
0.627
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.822
0.542
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM
KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.810
0.542
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ca_18932
WRKY
100
160
DDGHQWRKYGQKTIQTSKYARNYYRCSHKFEERCDATKQVQRIQEKPPLYKSTYYTHHTCK
Links
Other
WRKY
family TFs
Other
Cicer arietinum
TFs
129 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
WRKY63
Arabidopsis thaliana
AT1G66600
D
0.828
WRKY62
Arabidopsis thaliana
AT5G01900
D
0.810
WRKY38
Arabidopsis thaliana
AT5G22570
D
0.822
Al_scaffold_0002_1233
Arabidopsis lyrata
Al_scaffold_0002_1233
I
0.819
WRKY62
Arabidopsis lyrata
Al_scaffold_0006_13
I
0.810
WRKY67
Arabidopsis thaliana
AT1G66550
I
0.818
WRKY64
Arabidopsis thaliana
AT1G66560
I
0.824
WRKY66
Arabidopsis thaliana
AT1G80590
I
0.818
BGIOSGA012571
Oryza indica
BGIOSGA012571
I
0.819
Bo01002s040
Brassica oleracea
Bo01002s040
I
0.832
Bo2g024040
Brassica oleracea
Bo2g024040
I
0.829
Bra002421
Brassica rapa
Bra002421
I
0.832
Bra020196
Brassica rapa
Bra020196
I
0.831
Bra020197
Brassica rapa
Bra020197
I
0.829
Bra028918
Brassica rapa
Bra028918
I
0.814
BRADI1G63220
Brachypodium distachyon
BRADI1G63220
I
0.810
F775_07376
Aegilops tauschii
F775_07376
I
0.811
WRKY67
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000969
I
0.816
GLYMA03G00460
Glycine max
GLYMA03G00460
I
0.841
GLYMA04G40130
Glycine max
GLYMA04G40130
I
0.813
GLYMA06G14720
Glycine max
GLYMA06G14720
I
0.813
GLYMA09G41050
Glycine max
GLYMA09G41050
I
0.846
GLYMA13G34240
Glycine max
GLYMA13G34240
I
0.832
GLYMA13G34251
Glycine max
GLYMA13G34251
I
0.811
GLYMA13G34261
Glycine max
GLYMA13G34261
I
0.820
GLYMA13G34281
Glycine max
GLYMA13G34281
I
0.817
GLYMA16G34590
Glycine max
GLYMA16G34590
I
0.843
GLYMA18G44560
Glycine max
GLYMA18G44560
I
0.834
GSMUA_Achr8G25110_001
Musa acuminata
GSMUA_Achr8G25110_001
I
0.813
LPERR05G06630
Leersia perrieri
LPERR05G06630
I
0.808
MTR_0002s1250
Medicago truncatula
MTR_0002s1250
I
0.843
MTR_2g075610
Medicago truncatula
MTR_2g075610
I
0.825
MTR_2g075680
Medicago truncatula
MTR_2g075680
I
0.840
MTR_2g075690
Medicago truncatula
MTR_2g075690
I
0.844
MTR_2g075700
Medicago truncatula
MTR_2g075700
I
0.824
MTR_2g075750
Medicago truncatula
MTR_2g075750
I
0.825
MTR_7g073380
Medicago truncatula
MTR_7g073380
I
0.836
MTR_7g073430
Medicago truncatula
MTR_7g073430
I
0.822
MTR_8g005750
Medicago truncatula
MTR_8g005750
I
0.864
OB03G26140
Oryza brachyantha
OB03G26140
I
0.816
OB05G17240
Oryza brachyantha
OB05G17240
I
0.815
OBART03G16400
Oryza barthii
OBART03G16400
I
0.819
OGLUM03G16780
Oryza glumaepatula
OGLUM03G16780
I
0.819
OLONG_024544
Oryza longistaminata
OLONG_024544
I
0.819
OMERI03G14670
Oryza meridionalis
OMERI03G14670
I
0.819
ONIVA03G17390
Oryza nivara
ONIVA03G17390
I
0.819
ORGLA09G0026100
Oryza glaberrima
ORGLA09G0026100
I
0.808
ORUFI03G16960
Oryza rufipogon
ORUFI03G16960
I
0.819
OS03G0335200
Oryza sativa
OS03G0335200
I
0.819
PGSC0003DMG400008391
Solanum tuberosum
PGSC0003DMG400008391
I
0.848
PGSC0003DMG400020608
Solanum tuberosum
PGSC0003DMG400020608
I
0.811
PGSC0003DMG400027582
Solanum tuberosum
PGSC0003DMG400027582
I
0.838
PGSC0003DMG400029207
Solanum tuberosum
PGSC0003DMG400029207
I
0.838
POPTR_0006s10950
Populus trichocarpa
POPTR_0006s10950
I
0.841
POPTR_0016s14490
Populus trichocarpa
POPTR_0016s14490
I
0.848
PRUPE_ppa020736mg
Prunus persica
PRUPE_ppa020736mg
I
0.841
PRUPE_ppa025912mg
Prunus persica
PRUPE_ppa025912mg
I
0.826
PRUPE_ppa026704mg
Prunus persica
PRUPE_ppa026704mg
I
0.837
Sb01g036180
Sorghum bicolor
Sb01g036180
I
0.813
Sb08g005080
Sorghum bicolor
Sb08g005080
I
0.811
WRKY38
Arabidopsis lyrata
scaffold_602308.1
I
0.822
Si022702m.g
Setaria italica
Si022702m.g
I
0.808
Si025181m.g
Setaria italica
Si025181m.g
I
0.816
Si030395m.g
Setaria italica
Si030395m.g
I
0.810
Si036565m.g
Setaria italica
Si036565m.g
I
0.817
Solyc03g095770.2
Solanum lycopersicum
Solyc03g095770.2
I
0.810
Solyc09g015770.2
Solanum lycopersicum
Solyc09g015770.2
I
0.838
TCM_019689
Theobroma cacao
TCM_019689
I
0.839
VIT_08s0058g01390
Vitis vinifera
VIT_08s0058g01390
I
0.813
Ca_09495
Cicer arietinum
Ca_09495
I
0.836
Ca_12915
Cicer arietinum
Ca_12915
I
0.839
Cla018337
Citrullus lanatus
Cla018337
I
0.861
Pm003013
Prunus mume
Pm003013
I
0.839
Pm003014
Prunus mume
Pm003014
I
0.841
Pm003015
Prunus mume
Pm003015
I
0.832
29729.m002369
Ricinus communis
29729.m002369
I
0.822
29915.m000479
Ricinus communis
29915.m000479
I
0.835
cassava25180.valid.m1
Manihot esculenta
cassava25180.valid.m1
I
0.844
cassava36286.valid.m1
Manihot esculenta
cassava36286.valid.m1
I
0.849
cassava43790.valid.m1
Manihot esculenta
cassava43790.valid.m1
I
0.825
cassava7524.valid.m1
Manihot esculenta
cassava7524.valid.m1
I
0.817
cassava7525.valid.m1
Manihot esculenta
cassava7525.valid.m1
I
0.817
Cucsa.177060
Cucumis sativus
Cucsa.177060
I
0.848
mgf002542m
Mimulus guttatus
mgf002542m
I
0.826
mgf009193m
Mimulus guttatus
mgf009193m
I
0.827
Aquca_027_00037
Aquilegia coerulea
Aquca_027_00037
I
0.819
Bostr.25463s0359
Boechera stricta
Bostr.25463s0359
I
0.810
Bostr.26527s0018
Boechera stricta
Bostr.26527s0018
I
0.812
Bostr.26959s0262
Boechera stricta
Bostr.26959s0262
I
0.819
Bostr.5022s0087
Boechera stricta
Bostr.5022s0087
I
0.808
Cagra.15225s0001
Capsella grandiflora
Cagra.15225s0001
I
0.826
Cagra.8153s0001
Capsella grandiflora
Cagra.8153s0001
I
0.823
Carubv10002472m.g
Capsella rubella
Carubv10002472m.g
I
0.823
Carubv10021420m.g
Capsella rubella
Carubv10021420m.g
I
0.826
Carubv10021899m.g
Capsella rubella
Carubv10021899m.g
I
0.816
Carubv10022120m.g
Capsella rubella
Carubv10022120m.g
I
0.815
Carubv10022162m.g
Capsella rubella
Carubv10022162m.g
I
0.812
Ciclev10012055m.g
Citrus clementina
Ciclev10012055m.g
I
0.837
Ciclev10032192m.g
Citrus clementina
Ciclev10032192m.g
I
0.809
Ciclev10033384m.g
Citrus clementina
Ciclev10033384m.g
I
0.808
Eucgr.K01289
Eucalyptus grandis
Eucgr.K01289
I
0.829
evm.TU.supercontig_86.64
Carica papaya
evm.TU.supercontig_86.64
I
0.820
evm.TU.supercontig_86.65
Carica papaya
evm.TU.supercontig_86.65
I
0.818
gene13546-v1.0-hybrid
Fragaria vesca
gene13546-v1.0-hybrid
I
0.836
gene13547-v1.0-hybrid
Fragaria vesca
gene13547-v1.0-hybrid
I
0.831
gene13549-v1.0-hybrid
Fragaria vesca
gene13549-v1.0-hybrid
I
0.814
gene13554-v1.0-hybrid
Fragaria vesca
gene13554-v1.0-hybrid
I
0.811
Gorai.005G003900
Gossypium raimondii
Gorai.005G003900
I
0.817
Lus10025133.g
Linum usitatissimum
Lus10025133.g
I
0.829
Lus10025216.g
Linum usitatissimum
Lus10025216.g
I
0.838
Lus10030517.g
Linum usitatissimum
Lus10030517.g
I
0.816
MDP0000578301
Malus domestica
MDP0000578301
I
0.812
MDP0000754989
Malus domestica
MDP0000754989
I
0.823
orange1.1g018407m.g
Citrus sinensis
orange1.1g018407m.g
I
0.808
orange1.1g020291m.g
Citrus sinensis
orange1.1g020291m.g
I
0.837
orange1.1g021598m.g
Citrus sinensis
orange1.1g021598m.g
I
0.809
Pavir.Ca00459
Panicum virgatum
Pavir.Ca00459
I
0.826
Pavir.Ca02012
Panicum virgatum
Pavir.Ca02012
I
0.808
Pavir.Cb01173
Panicum virgatum
Pavir.Cb01173
I
0.808
Pavir.Ib01568
Panicum virgatum
Pavir.Ib01568
I
0.816
Pavir.J05812
Panicum virgatum
Pavir.J05812
I
0.816
SapurV1A.0065s0580
Salix purpurea
SapurV1A.0065s0580
I
0.846
SapurV1A.0356s0010
Salix purpurea
SapurV1A.0356s0010
I
0.837
SapurV1A.0914s0120
Salix purpurea
SapurV1A.0914s0120
I
0.837
Thhalv10014700m.g
Eutrema salsugineum
Thhalv10014700m.g
I
0.813
Thhalv10015295m.g
Eutrema salsugineum
Thhalv10015295m.g
I
0.820
PK03324.1
Cannabis sativa
PK03324.1
I
0.823
PDK_20s1519811g002
Phoenix dactylifera
PDK_20s1519811g002
I
0.814
MTR_8g032510
Medicago truncatula
MTR_8g032510
N
0.847