Pm003013 (Prunus mume)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pm003013 T355334_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.830 0.627
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.830 0.627
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.823 0.610
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm003013 WRKY 153 213

Links

Other WRKY family TFs
Other Prunus mume TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pvit_17416 Pogona vitticeps Pvit_17416 I 0.000
TTRE_0000529701 Trichuris trichiura TTRE_0000529701 I 0.000
RSKR_0000416900 Rhabditophanes kr3021 RSKR_0000416900 I 0.000
DICVIV_09734 Dictyocaulus viviparus DICVIV_09734 I 0.000
D918_03949 Trichuris suis D918_03949 I 0.000
D917_07801 Trichinella nativa D917_07801 I 0.000
D915_02388 Fasciola hepatica D915_02388 I 0.000
XP_002156969.1 Hydra magnipapillata XP_002156969.1 I 0.000
six2.S Xenopus laevis XB-GENE-865135 I 0.000
six4 Xenopus tropicalis XB-GENE-481699 I 0.000
six1.L Xenopus laevis XB-GENE-480721 I 0.000
Sjc_0079530 Schistosoma japonicum Sjc_0079530 I 0.000
HHAL006656-PA Halyomorpha halys HHAL006656-PA I 0.000
CLEC005547 Cimex lectularius CLEC005547 I 0.000
AAG42360 Xenopus laevis AAG42360 I 0.000
e_gw.52.107.1 Branchiostoma floridae e_gw.52.107.1 I 0.000
CRE30662 Caenorhabditis remanei CRE30662 I 0.000
PPA14204 Pristionchus pacificus PPA14204 I 0.000
NEMVEDRAFT_v1g157078 Nematostella vectensis NEMVEDRAFT_v1g157078 I 0.000
NEMVEDRAFT_v1g138693 Nematostella vectensis NEMVEDRAFT_v1g138693 I 0.000
ENSXMAG00000004315 Xiphophorus maculatus ENSXMAG00000004315 I 0.000
six5 Takifugu rubripes ENSTRUG00000011163 I 0.000
six5 Tetraodon nigroviridis ENSTNIG00000007742 I 0.000
ENSPMAG00000009968 Petromyzon marinus ENSPMAG00000009968 I 0.000
ENSPFOG00000009796 Poecilia formosa ENSPFOG00000009796 I 0.000
six5 Oryzias latipes ENSORLG00000006762 I 0.000
ENSONIG00000003682 Oreochromis niloticus ENSONIG00000003682 I 0.000
ENSGMOG00000010829 Gadus morhua ENSGMOG00000010829 I 0.000
six5 Gasterosteus aculeatus ENSGACG00000009721 I 0.000
six5 Danio rerio ENSDARG00000068406 I 0.000
DAPPUDRAFT_27769 Daphnia pulex DAPPUDRAFT_27769 I 0.000
ENSPMAG00000010180 Petromyzon marinus ENSPMAG00000010180 N 0.000