Cagra.20277s0001 (Capsella grandiflora)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cagra.20277s0001 T355906_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.833 0.848
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.823 0.696
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.822 0.696
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.20277s0001.1.p WRKY 107 154

Links

Other WRKY family TFs
Other Capsella grandiflora TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SVE_0118900 Strongyloides venezuelensis SVE_0118900 I 0.000
BGLB006871 Biomphalaria glabrata BGLB006871 I 0.000
AFUN001443 Anopheles funestus AFUN001443 I 0.000
LDEC004906 Leptinotarsa decemlineata LDEC004906 I 0.000
Ocbimv22005044m.g Octopus bimaculoides Ocbimv22005044m.g I 0.000
TC006814 Tribolium castaneum TC006814 I 0.000
NV16554 Nasonia vitripennis NV16554 I 0.000
LotgiG79422 Lottia gigantea LotgiG79422 I 0.000
SPAL_0001132900 Strongyloides papillosus SPAL_0001132900 I 0.000
SSTP_0000472400 Strongyloides stercoralis SSTP_0000472400 I 0.000
CapteG178526 Capitella teleta CapteG178526 I 0.000
PTRK_0001642900 Parastrongyloides trichosuri PTRK_0001642900 N 0.000
EEL_0000136901 Elaeophora elaphi EEL_0000136901 N 0.000
nRc.2.0.1.g44757 Romanomermis culicivorax nRc.2.0.1.g44757 N 0.000
nOo.2.0.1.g03644 Onchocerca ochengi nOo.2.0.1.g03644 N 0.000
nLs.2.1.2.g02189 Litomosoides sigmodontis nLs.2.1.2.g02189 N 0.000
nDi.2.2.2.g00486 Dirofilaria immitis nDi.2.2.2.g00486 N 0.000
nAv.1.0.1.g03257 Acanthocheilonema viteae nAv.1.0.1.g03257 N 0.000
L898_g22792 Steinernema monticolum L898_g22792 N 0.000
L893_g25726 Steinernema glaseri L893_g25726 N 0.000
L892_g23905 Steinernema scapterisci L892_g23905 N 0.000
L889_g29315 Steinernema feltiae L889_g29315 N 0.000
L596_g21776 Steinernema carpocapsae L596_g21776 N 0.000
GPUH_0001488401 Gongylonema pulchrum GPUH_0001488401 N 0.000
GPLIN_000544200 Globodera pallida GPLIN_000544200 N 0.000
GPLIN_000092900 Globodera pallida GPLIN_000092900 N 0.000
WUBG_03870 Wuchereria bancrofti WUBG_03870 N 0.000
DME_0000120101 Dracunculus medinensis DME_0000120101 N 0.000
D917_04029 Trichinella nativa D917_04029 N 0.000
BXY_1725100 Bursaphelenchus xylophilus BXY_1725100 N 0.000
ASU_11495 Ascaris suum ASU_11495 N 0.000
ALUE_0001723901 Ascaris lumbricoides ALUE_0001723901 N 0.000
WBGene00247331 Onchocerca volvulus WBGene00247331 N 0.000
HelroG173259 Helobdella robusta HelroG173259 N 0.000
EFV52379 Trichinella spiralis EFV52379 N 0.000
Bm5997 Brugia malayi Bm5997 N 0.000