Cagra.8153s0001 (Capsella grandiflora)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cagra.8153s0001 T355931_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY38
M00901_2.00 		Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN		 PBM
Franco-Zorrilla et al.(2014)
WRKY38 		0.871 0.915
WRKY62
M02561_2.00 		Arabidopsis thaliana
TRGTCAAM
KTTGACYA		 PBM
Weirauch et al.(2014)
pTH8246 		0.833 0.661
WRKY63
M02546_2.00 		Arabidopsis thaliana
NGGTCAAN
NTTGACCN		 PBM
Weirauch et al.(2014)
pTH8182 		0.824 0.661
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.8153s0001.1.p WRKY 113 173

Links

Other WRKY family TFs
Other Capsella grandiflora TFs

67 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LLOJ004179 Lutzomyia longipalpis LLOJ004179 I 0.000
ENSAMXG00000014185 Astyanax mexicanus ENSAMXG00000014185 N 0.000
Sakowv30024320m.g Saccoglossus kowalevskii Sakowv30024320m.g N 0.000