CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ACLA_078050
(
Aspergillus clavatus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CADACLAG00007361
T360896_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_03217
M01404_2.00
Aspergillus nidulans
NNYCCGGRNNNN
NNNNYCCGGRNN
PBM
Lambert et al.(2019)
pEX0292
0.594
0.763
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADACLAP00007185
Zinc cluster
17
55
KACQECRKRKIKCNGINPCKTCQLRNTPCVYRDVVRQRK
Links
Other
Zinc cluster
family TFs
Other
Aspergillus clavatus
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.23794s0621
Boechera stricta
Bostr.23794s0621
N
ORGLA12G0114800
Oryza glaberrima
ORGLA12G0114800
N
ORUFI12G13970
Oryza rufipogon
ORUFI12G13970
N
PRUPE_ppa017597mg
Prunus persica
PRUPE_ppa017597mg
N
Si038598m.g
Setaria italica
Si038598m.g
N
Traes_5BL_B55F708EC
Triticum aestivum
Traes_5BL_B55F708EC
N
Traes_5DL_84C86F76D
Triticum aestivum
Traes_5DL_84C86F76D
N
Pm010610
Prunus mume
Pm010610
N
Bostr.15697s0367
Boechera stricta
Bostr.15697s0367
N
OPUNC12G11490
Oryza punctata
OPUNC12G11490
N
Cagra.1508s0136
Capsella grandiflora
Cagra.1508s0136
N
Carubv10011063m.g
Capsella rubella
Carubv10011063m.g
N
Ciclev10017579m.g
Citrus clementina
Ciclev10017579m.g
N
Lus10005451.g
Linum usitatissimum
Lus10005451.g
N
Lus10038432.g
Linum usitatissimum
Lus10038432.g
N
orange1.1g041370m.g
Citrus sinensis
orange1.1g041370m.g
N
Thhalv10017751m.g
Eutrema salsugineum
Thhalv10017751m.g
N
Al_scaffold_0004_1965
Arabidopsis lyrata
Al_scaffold_0004_1965
N
ONIVA12G13030
Oryza nivara
ONIVA12G13030
N
OGLUM12G14400
Oryza glumaepatula
OGLUM12G14400
N
OB12G20560
Oryza brachyantha
OB12G20560
N
fgenesh1_pm.C_scaffold_1002485
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_1002485
N
F775_52642
Aegilops tauschii
F775_52642
N
BRADI4G29370
Brachypodium distachyon
BRADI4G29370
N
Bra022993
Brassica rapa
Bra022993
N
Bra021933
Brassica rapa
Bra021933
N
Bra005389
Brassica rapa
Bra005389
N
Bo4g182930
Brassica oleracea
Bo4g182930
N
Bo4g039270
Brassica oleracea
Bo4g039270
N
Bo3g028090
Brassica oleracea
Bo3g028090
N
BGIOSGA037431
Oryza indica
BGIOSGA037431
N
BHLH53
Arabidopsis thaliana
AT2G34820
N
BHLH52
Arabidopsis thaliana
AT1G30670
N