CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cob_10342
(
Colletotrichum orbiculare
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
Cob_10342
T364511_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
tah-3
M02601_2.00
Neurospora crassa
NYCGKRHN
NDYMCGRN
PBM
Weirauch et al.(2014)
pTH8887
0.664
0.875
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENH80890
Zinc cluster
18
57
KGCETCKKRHIRCDENFPQCRNCTKHKIRCPYNDQPVPED
Links
Other
Zinc cluster
family TFs
Other
Colletotrichum orbiculare
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA09G00371
Glycine max
GLYMA09G00371
N
0.000
GLYMA12G37026
Glycine max
GLYMA12G37026
N
0.000
GRMZM2G046443
Zea mays
GRMZM2G046443
N
0.000
PRUPE_ppa016603mg
Prunus persica
PRUPE_ppa016603mg
N
0.000
Sb07g027160
Sorghum bicolor
Sb07g027160
N
0.000
Si015815m.g
Setaria italica
Si015815m.g
N
0.000
Pm019530
Prunus mume
Pm019530
N
0.000
Pm031387
Prunus mume
Pm031387
N
0.000
Bostr.13158s0046
Boechera stricta
Bostr.13158s0046
N
0.000
Gorai.004G165400
Gossypium raimondii
Gorai.004G165400
N
0.000
Lus10009780.g
Linum usitatissimum
Lus10009780.g
N
0.000
Pavir.Fa00479
Panicum virgatum
Pavir.Fa00479
N
0.000
Pavir.Fb01900
Panicum virgatum
Pavir.Fb01900
N
0.000