CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPC735_024740
(
Coccidioides posadasii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CPC735_024740
T365627_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_05620
M02579_2.00
Histoplasma capsulatum
NNNCGGNHNN
NNDNCCGNNN
PBM
Weirauch et al.(2014)
pTH8594
0.606
0.925
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EER27138
Zinc cluster
111
154
IACRYCRRRKIRCSGFESSHDGRCSNCVRFNQDCMFTPVSSQTQ
Links
Other
Zinc cluster
family TFs
Other
Coccidioides posadasii
TFs
104 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000841703
Malus domestica
MDP0000841703
I
LPERR05G16930
Leersia perrieri
LPERR05G16930
I
OBART05G21120
Oryza barthii
OBART05G21120
I
OGLUM05G22330
Oryza glumaepatula
OGLUM05G22330
I
ONIVA05G21800
Oryza nivara
ONIVA05G21800
I
OPUNC01G33690
Oryza punctata
OPUNC01G33690
I
OPUNC05G18800
Oryza punctata
OPUNC05G18800
I
BGIOSGA017818
Oryza indica
BGIOSGA017818
I
ORUFI05G22370
Oryza rufipogon
ORUFI05G22370
I
OS05G0490600
Oryza sativa
OS05G0490600
I
ORGLA05G0183100
Oryza glaberrima
ORGLA05G0183100
N
cassava33620.m1
Manihot esculenta
cassava33620.m1
N
30064.m000484
Ricinus communis
30064.m000484
N
Traes_1DL_57F246ADF
Triticum aestivum
Traes_1DL_57F246ADF
N
SELMODRAFT_93784
Selaginella moellendorffii
SELMODRAFT_93784
N
OS06G0605750
Oryza sativa
OS06G0605750
N
F775_09422
Aegilops tauschii
F775_09422
N