CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMPREF1541_00734
(
Cyphellophora europaea
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
HMPREF1541_00734
T370856_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ETN46549
Zinc cluster
9
47
LSCARCRRRKIKCDRAIPCGQCVTAKTSCTGYSSKDQDP
Links
Other
Zinc cluster
family TFs
Other
Cyphellophora europaea
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
REM19
Arabidopsis thaliana
AT1G49480
D
29851.m002498
Ricinus communis
29851.m002498
I
Bo5g076230
Brassica oleracea
Bo5g076230
I
cassava29880.valid.m1
Manihot esculenta
cassava29880.valid.m1
I
Bostr.26675s0223
Boechera stricta
Bostr.26675s0223
I
Cagra.4084s0003
Capsella grandiflora
Cagra.4084s0003
I
Carubv10010224m.g
Capsella rubella
Carubv10010224m.g
I
gene31955-v1.0-hybrid
Fragaria vesca
gene31955-v1.0-hybrid
I
Gorai.002G006500
Gossypium raimondii
Gorai.002G006500
I
Gorai.005G240900
Gossypium raimondii
Gorai.005G240900
I
Gorai.012G150900
Gossypium raimondii
Gorai.012G150900
I
Gorai.013G039800
Gossypium raimondii
Gorai.013G039800
I
Gorai.013G040000
Gossypium raimondii
Gorai.013G040000
I
SapurV1A.0979s0040
Salix purpurea
SapurV1A.0979s0040
I
Thhalv10012062m.g
Eutrema salsugineum
Thhalv10012062m.g
I
PK10791.1
Cannabis sativa
PK10791.1
I
chr2.CM0262.200.nc
Lotus japonicus
chr2.CM0262.200.nc
I
chr2.CM0308.470.nd
Lotus japonicus
chr2.CM0308.470.nd
I
Bra014192
Brassica rapa
Bra014192
I
TCM_006971
Theobroma cacao
TCM_006971
I
RTV1
Arabidopsis lyrata
scaffold_104641.1
I
PRUPE_ppa006275mg
Prunus persica
PRUPE_ppa006275mg
I
POPTR_0004s15400
Populus trichocarpa
POPTR_0004s15400
I
Bra032286
Brassica rapa
Bra032286
I
GLYMA07G21160
Glycine max
GLYMA07G21160
I
GLYMA20G01130
Glycine max
GLYMA20G01130
N
chr3.LjT23H01.130.nc
Lotus japonicus
chr3.LjT23H01.130.nc
N
GLYMA11G13210
Glycine max
GLYMA11G13210
N
GLYMA12G05250
Glycine max
GLYMA12G05250
N
MDP0000555456
Malus domestica
MDP0000555456
N
MDP0000238744
Malus domestica
MDP0000238744
N
Lus10012041.g
Linum usitatissimum
Lus10012041.g
N
Pm021537
Prunus mume
Pm021537
N
MTR_1g034210
Medicago truncatula
MTR_1g034210
N
MTR_1g034240
Medicago truncatula
MTR_1g034240
N
MTR_4g068320
Medicago truncatula
MTR_4g068320
N
Ca_13671
Cicer arietinum
Ca_13671
N
Ca_14825
Cicer arietinum
Ca_14825
N