PFICI_02807 (Pestalotiopsis fici)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 PFICI_02807 T377880_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HCBG_05620
M02579_2.00 		Histoplasma capsulatum
NNNCGGNHNN
NNDNCCGNNN		 PBM
Weirauch et al.(2014)
pTH8594 		0.616 0.725
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETS84782 Zinc cluster 207 250

Links

Other Zinc cluster family TFs
Other Pestalotiopsis fici TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N
Cucsa.308180 Cucumis sativus Cucsa.308180 N
Lus10019773.g Linum usitatissimum Lus10019773.g N
Lus10024177.g Linum usitatissimum Lus10024177.g N
Lus10039562.g Linum usitatissimum Lus10039562.g N
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N
PK02707.1 Cannabis sativa PK02707.1 N
Pm012190 Prunus mume Pm012190 N
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N
TCM_040833 Theobroma cacao TCM_040833 N
TCM_042392 Theobroma cacao TCM_042392 N
SCL3 Vitis vinifera VIT_06s0009g02390 N
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N
Cla020893 Citrullus lanatus Cla020893 N
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N
Pm016466 Prunus mume Pm016466 N
Pm029840 Prunus mume Pm029840 N
30024.m001746 Ricinus communis 30024.m001746 N
30131.m007244 Ricinus communis 30131.m007244 N
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N
cassava20989.m1 Manihot esculenta cassava20989.m1 N