CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PTRG_09915
(
Pyrenophora triticirepentis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PTRG_09915
T379575_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01243
M02588_2.00
Neurospora crassa
NNNSCGN
NCGSNNN
PBM
Weirauch et al.(2014)
pTH8917
0.589
0.889
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDU42966
Zinc cluster
577
615
RCQRCRKSKKGCDRQRPCQRCKDAGISADGCVSEDEGNG
Links
Other
Zinc cluster
family TFs
Other
Pyrenophora triticirepentis
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCMIDRAFT_84123
Bipolaris oryzae
COCMIDRAFT_84123
N
PTT_13993
Pyrenophora teres
PTT_13993
N
AB08540.1
Alternaria brassicicola
AB08540.1
N