SMAC_05948 (Sordaria macrospora)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 SMAC_05948 T383967_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02525
M02596_2.00 		Neurospora crassa
NNNNHCGGNN
NNCCGDNNNN		 PBM
Weirauch et al.(2014)
pTH8964 		0.683 0.923
ANIA_09147
M02574_2.00 		Aspergillus nidulans
NNNNHCGGNN
NNCCGDNNNN		 PBM
Weirauch et al.(2014)
pTH8347 		0.619 0.769
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCC08592 Zinc cluster 182 224

Links

Other Zinc cluster family TFs
Other Sordaria macrospora TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA022583 Oryza indica BGIOSGA022583 N
LPERR01G26350 Leersia perrieri LPERR01G26350 N
LPERR02G12330 Leersia perrieri LPERR02G12330 N
OB01G10540 Oryza brachyantha OB01G10540 N
OBART06G08210 Oryza barthii OBART06G08210 N
OGLUM06G08790 Oryza glumaepatula OGLUM06G08790 N
OLONG_012955 Oryza longistaminata OLONG_012955 N
OMERI06G09800 Oryza meridionalis OMERI06G09800 N
ONIVA06G09490 Oryza nivara ONIVA06G09490 N
OPUNC06G07980 Oryza punctata OPUNC06G07980 N
ORGLA06G0078200 Oryza glaberrima ORGLA06G0078200 N
ORUFI06G08550 Oryza rufipogon ORUFI06G08550 N
Pavir.Ea02883 Panicum virgatum Pavir.Ea02883 N