VDAG_05809 (Verticillium dahliae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDAG_05809 T387352_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
vad-3
M02614_2.00 		Neurospora crassa
NNNCGGCANWT
AWNTGCCGNNN		 PBM
Weirauch et al.(2014)
pTH7811 		0.660 0.974
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EGY14645 Zinc cluster 122 160

Links

Other Zinc cluster family TFs
Other Verticillium dahliae TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
S1FA3 Arabidopsis thaliana AT3G09735 D
Thhalv10021874m.g Eutrema salsugineum Thhalv10021874m.g I
S1FA2 Arabidopsis thaliana AT2G37120 I
SapurV1A.0209s0130 Salix purpurea SapurV1A.0209s0130 I
SapurV1A.0112s0080 Salix purpurea SapurV1A.0112s0080 I
Gorai.009G419300 Gossypium raimondii Gorai.009G419300 I
Gorai.002G249300 Gossypium raimondii Gorai.002G249300 I
Carubv10015035m.g Capsella rubella Carubv10015035m.g I
Bostr.22252s0094 Boechera stricta Bostr.22252s0094 I
mgf004062m Mimulus guttatus mgf004062m I
scaffold_402348.1 Arabidopsis lyrata scaffold_402348.1 I
POPTR_0016s08890 Populus trichocarpa POPTR_0016s08890 I
POPTR_0006s13230 Populus trichocarpa POPTR_0006s13230 I
MTR_7g100905 Medicago truncatula MTR_7g100905 I
GLYMA19G36350 Glycine max GLYMA19G36350 I
GLYMA03G33640 Glycine max GLYMA03G33640 I
fgenesh2_kg.3__997__AT3G09735.1 Arabidopsis lyrata fgenesh2_kg.3__997__AT3G09735.1 I
Bra034084 Brassica rapa Bra034084 I
Bra029784 Brassica rapa Bra029784 I
Bra003132 Brassica rapa Bra003132 I
Bo6g067310 Brassica oleracea Bo6g067310 I
Bo5g138130 Brassica oleracea Bo5g138130 I
Bo3g061880 Brassica oleracea Bo3g061880 I
Bo1g144300 Brassica oleracea Bo1g144300 I
Bo00703s150 Brassica oleracea Bo00703s150 I
Bo00703s130 Brassica oleracea Bo00703s130 I
S1FA1 Arabidopsis thaliana AT3G53370 I