VDBG_01960 (Verticillium alfalfae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VDBG_01960 T387466_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HCBG_05620
M02579_2.00 		Histoplasma capsulatum
NNNCGGNHNN
NNDNCCGNNN		 PBM
Weirauch et al.(2014)
pTH8594 		0.569 0.675
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EEY15851 Zinc cluster 189 232

Links

Other Zinc cluster family TFs
Other Verticillium alfalfae TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SINV24790 Solenopsis invicta SINV24790 N
NBR_0000453101 Nippostrongylus brasiliensis NBR_0000453101 N
ADIR014323 Anopheles dirus ADIR014323 N
LDEC007450 Leptinotarsa decemlineata LDEC007450 N
LDEC007148 Leptinotarsa decemlineata LDEC007148 N
LDEC003385 Leptinotarsa decemlineata LDEC003385 N
LDEC000062 Leptinotarsa decemlineata LDEC000062 N
Hsal_18518--NA Harpegnathos saltator Hsal_18518--NA N
YQE_01887 Dendroctonus ponderosae YQE_01887 N
ACYPI083866 Acyrthosiphon pisum ACYPI083866 N
SINV12396 Solenopsis invicta SINV12396 N
RPRC013889 Rhodnius prolixus RPRC013889 N
GL21993 Drosophila persimilis FBgn0159586 N
ACYPI51172 Acyrthosiphon pisum ACYPI51172 N
ACYPI21993 Acyrthosiphon pisum ACYPI21993 N
ACYPI21081 Acyrthosiphon pisum ACYPI21081 N
ACYPI20871 Acyrthosiphon pisum ACYPI20871 N