ECM22 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YLR228C T388363_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ECM22
M00096_2.00		 Saccharomyces cerevisiae
NNCSGRDNHN
NDNHYCSGNN		 PBM
Badis et al.(2008)
ECM22_2066		 (Direct) (Direct)
ECM22
M00924_2.00		 Saccharomyces cerevisiae
NNDWACGRN
NYCGTWHNN		 PBM
Gordan et al.(2011)
Ecm22		 (Direct) (Direct)
ECM22
M01589_2.00		 Saccharomyces cerevisiae
NNNCGGVN
NBCCGNNN		 PBM
Zhu et al.(2009)
Ecm22		 (Direct) (Direct)
ECM22
M07522_2.00		 Saccharomyces cerevisiae
TCCGGAD
HTCCGGA		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0292.1		 (Direct) (Direct)
ECM22
M08679_2.00		 Saccharomyces cerevisiae
NNYCGGRNNDMCGGAVNH
DNBTCCGKHNNYCCGRNN		 Misc
DeBoer et al.(2011)
YLR228C_849		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UPC2
M00920_2.00 		Saccharomyces cerevisiae
NTCGTWYVN
NBRWACGAN		 PBM
Gordan et al.(2011)
Upc2 		0.541 0.675
UPC2
M07508_2.00 		Saccharomyces cerevisiae
NRWACGA
TCGTWYN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0411.1 		0.541 0.675
UPC2
M08654_2.00 		Saccharomyces cerevisiae
NRWACGA
TCGTWYN		 Misc
DeBoer et al.(2011)
YDR213W_544 		0.541 0.675
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00096_2.00 Zinc cluster 41 80
M00924_2.00 Zinc cluster 42 81
M01589_2.00 Zinc cluster 42 81

DNA Binding Domains

Protein ID Domain From To Sequence
YLR228C Zinc cluster 42 81

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AACERI_AaceriADL152W Saccharomycetaceae sp ashbya aceri AACERI_AaceriADL152W N
Ecym_2058 Eremothecium cymbalariae Ecym_2058 N
KLLA0_A07337g Kluyveromyces lactis KLLA0_A07337g N
SAKL0C12452g Lachancea kluyveri SAKL0C12452g N