CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pm.C_sca_39_chr11_5_00049
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pm.C_sca_39_chr11_5_00049
T389688_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pm.C_sca_39_chr11_5_00049
Zinc cluster
31
70
TGCITCKKRHIKCDEKKPTCGNCLKNRRRCEGYIEQQSKT
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_128120
Schistosoma mansoni
Smp_128120
N
SMU15005401
Schmidtea mediterranea
SMU15005401
N
A_04259
Schistosoma haematobium
A_04259
N
csin107639
Clonorchis sinensis
csin107639
N
DILT_0000112601
Diphyllobothrium latum
DILT_0000112601
N
ECPE_0001508301
Echinostoma caproni
ECPE_0001508301
N
EmuJ_000829600
Echinococcus multilocularis
EmuJ_000829600
N
HmN_000514500
Hymenolepis microstoma
HmN_000514500
N
HNAJ_0000040201
Hymenolepis nana
HNAJ_0000040201
N
PXEA_0001273001
Protopolystoma xenopodis
PXEA_0001273001
N
SCUD_0001647201
Schistosoma curassoni
SCUD_0001647201
N
SMTD_0001069201
Schistosoma mattheei
SMTD_0001069201
N
T265_05798
Opisthorchis viverrini
T265_05798
N
TRE_0001759501
Trichobilharzia regenti
TRE_0001759501
N
TsM_000416400
Taenia solium
TsM_000416400
N