CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pg.C_chr_3.1000351
(
Pichia stipitis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pg.C_chr_3.1000351
T390007_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_chr_3.1000351
Zinc cluster
14
55
RACTGCRQIKLKCDAIERFPKKCTRCQRLGHICEIDSGFKRE
Links
Other
Zinc cluster
family TFs
Other
Pichia stipitis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_152210
Schistosoma mansoni
Smp_152210
N
Sjc_0028750
Schistosoma japonicum
Sjc_0028750
N
A_05914
Schistosoma haematobium
A_05914
N
HDID_0001021001
Hymenolepis diminuta
HDID_0001021001
N
PXEA_0003350801
Protopolystoma xenopodis
PXEA_0003350801
N
SMTD_0000181401
Schistosoma mattheei
SMTD_0000181401
N
SSLN_0001439901
Schistocephalus solidus
SSLN_0001439901
N
TASK_0000489501
Taenia asiatica
TASK_0000489501
N
TRE_0001183001
Trichobilharzia regenti
TRE_0001183001
N