WIN1 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G15360 T000408_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WIN1
M01603_2.00		 Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.727 0.843
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.727 0.843
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.683 0.647
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.680 0.647
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.680 0.647
For this family, TFs with SR scores > 0.677 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01603_2.00 AP2 5 56

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G15360.1 AP2 5 56
AT1G15360.2 AP2 5 56

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

502 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001043 Ricinus communis 29738.m001043 I 0.000
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I 0.000
AMTR_s00010p00144270 Amborella trichopoda AMTR_s00010p00144270 I 0.000
Aquca_002_01095 Aquilegia coerulea Aquca_002_01095 I 0.000
Aquca_007_00571 Aquilegia coerulea Aquca_007_00571 N 0.000
BGIOSGA029777 Oryza indica BGIOSGA029777 I 0.000
BHLH30 Arabidopsis thaliana AT1G68810 I 0.000
BHLH32 Arabidopsis thaliana AT3G25710 I 0.000
BHLH32 Arabidopsis lyrata fgenesh2_kg.5__324__AT3G25710.1 I 0.000
Bo2g138630 Brassica oleracea Bo2g138630 I 0.000
Bo6g095860 Brassica oleracea Bo6g095860 I 0.000
Bo6g108270 Brassica oleracea Bo6g108270 I 0.000
Bo7g081980 Brassica oleracea Bo7g081980 I 0.000
Bostr.0556s0241 Boechera stricta Bostr.0556s0241 I 0.000
Bostr.26959s0001 Boechera stricta Bostr.26959s0001 I 0.000
Bra004015 Brassica rapa Bra004015 I 0.000
Bra004338 Brassica rapa Bra004338 I 0.000
Bra025158 Brassica rapa Bra025158 I 0.000
Bra026510 Brassica rapa Bra026510 I 0.000
BRADI1G67500 Brachypodium distachyon BRADI1G67500 I 0.000
BRADI3G36610 Brachypodium distachyon BRADI3G36610 N 0.000
BRADI4G29990 Brachypodium distachyon BRADI4G29990 N 0.000
Cagra.0417s0002 Capsella grandiflora Cagra.0417s0002 I 0.000
Cagra.1157s0003 Capsella grandiflora Cagra.1157s0003 I 0.000
Carubv10017470m.g Capsella rubella Carubv10017470m.g I 0.000
Carubv10020515m.g Capsella rubella Carubv10020515m.g I 0.000
cassava16550.m1 Manihot esculenta cassava16550.m1 I 0.000
cassava34286.m1 Manihot esculenta cassava34286.m1 N 0.000
cassava46299.m1 Manihot esculenta cassava46299.m1 I 0.000
Ca_08440 Cicer arietinum Ca_08440 I 0.000
Ca_14981 Cicer arietinum Ca_14981 N 0.000
Ca_18110 Cicer arietinum Ca_18110 N 0.000
Ca_24775 Cicer arietinum Ca_24775 I 0.000
chr2.CM0749.390.nc Lotus japonicus chr2.CM0749.390.nc I 0.000
Ciclev10002205m.g Citrus clementina Ciclev10002205m.g N 0.000
Ciclev10020323m.g Citrus clementina Ciclev10020323m.g I 0.000
Ciclev10031900m.g Citrus clementina Ciclev10031900m.g I 0.000
Cla000223 Citrullus lanatus Cla000223 I 0.000
Cla020671 Citrullus lanatus Cla020671 I 0.000
Cla022500 Citrullus lanatus Cla022500 N 0.000
Cucsa.160650 Cucumis sativus Cucsa.160650 N 0.000
Cucsa.283920 Cucumis sativus Cucsa.283920 I 0.000
Eucgr.G02351 Eucalyptus grandis Eucgr.G02351 I 0.000
evm.TU.supercontig_53.118 Carica papaya evm.TU.supercontig_53.118 I 0.000
evm.TU.supercontig_55.51 Carica papaya evm.TU.supercontig_55.51 N 0.000
evm.TU.supercontig_65.63 Carica papaya evm.TU.supercontig_65.63 N 0.000
F775_10096 Aegilops tauschii F775_10096 I 0.000
fgenesh2_kg.2__1138__AT1G68810.1 Arabidopsis lyrata fgenesh2_kg.2__1138__AT1G68810.1 I 0.000
GLYMA01G02930 Glycine max GLYMA01G02930 N 0.000
GLYMA01G22530 Glycine max GLYMA01G22530 I 0.000
GLYMA02G11190 Glycine max GLYMA02G11190 I 0.000
GLYMA02G37720 Glycine max GLYMA02G37720 N 0.000
GLYMA10G34910 Glycine max GLYMA10G34910 I 0.000
GLYMA14G36010 Glycine max GLYMA14G36010 N 0.000
GLYMA17G19570 Glycine max GLYMA17G19570 I 0.000
GLYMA20G32660 Glycine max GLYMA20G32660 I 0.000
Gorai.008G186700 Gossypium raimondii Gorai.008G186700 I 0.000
Gorai.009G230000 Gossypium raimondii Gorai.009G230000 N 0.000
Gorai.012G124100 Gossypium raimondii Gorai.012G124100 N 0.000
Gorai.013G079600 Gossypium raimondii Gorai.013G079600 I 0.000
GRMZM2G043854 Zea mays GRMZM2G043854 I 0.000
GRMZM2G107276 Zea mays GRMZM2G107276 I 0.000
GRMZM2G176141 Zea mays GRMZM2G176141 N 0.000
GRMZM2G526668 Zea mays GRMZM2G526668 I 0.000
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I 0.000
GSMUA_Achr1G21280_001 Musa acuminata GSMUA_Achr1G21280_001 I 0.000
GSMUA_Achr6G30610_001 Musa acuminata GSMUA_Achr6G30610_001 I 0.000
GSMUA_Achr7G07280_001 Musa acuminata GSMUA_Achr7G07280_001 I 0.000
LPERR03G10060 Leersia perrieri LPERR03G10060 I 0.000
LPERR08G12910 Leersia perrieri LPERR08G12910 I 0.000
LPERR09G06880 Leersia perrieri LPERR09G06880 I 0.000
Lus10021711.g Linum usitatissimum Lus10021711.g I 0.000
Lus10034271.g Linum usitatissimum Lus10034271.g I 0.000
Lus10035056.g Linum usitatissimum Lus10035056.g I 0.000
Lus10041493.g Linum usitatissimum Lus10041493.g I 0.000
MDP0000271420 Malus domestica MDP0000271420 I 0.000
MDP0000319726 Malus domestica MDP0000319726 I 0.000
MDP0000562627 Malus domestica MDP0000562627 N 0.000
mg025182m Mimulus guttatus mg025182m I 0.000
mgf017635m Mimulus guttatus mgf017635m I 0.000
MLOC_12832 Hordeum vulgare MLOC_12832 N 0.000
MLOC_66385 Hordeum vulgare MLOC_66385 I 0.000
MTR_1g093750 Medicago truncatula MTR_1g093750 I 0.000
MTR_5g066080 Medicago truncatula MTR_5g066080 N 0.000
OB03G21490 Oryza brachyantha OB03G21490 I 0.000
OB09G16590 Oryza brachyantha OB09G16590 N 0.000
OBART03G11320 Oryza barthii OBART03G11320 I 0.000
OBART08G15650 Oryza barthii OBART08G15650 I 0.000
OGLUM03G11280 Oryza glumaepatula OGLUM03G11280 I 0.000
OGLUM08G16400 Oryza glumaepatula OGLUM08G16400 I 0.000
OGLUM09G10310 Oryza glumaepatula OGLUM09G10310 N 0.000
OLONG_004075 Oryza longistaminata OLONG_004075 I 0.000
OLONG_011765 Oryza longistaminata OLONG_011765 N 0.000
OMERI08G12930 Oryza meridionalis OMERI08G12930 I 0.000
OMERI09G07780 Oryza meridionalis OMERI09G07780 I 0.000
ONIVA03G12280 Oryza nivara ONIVA03G12280 I 0.000
ONIVA08G16750 Oryza nivara ONIVA08G16750 I 0.000
ONIVA09G09550 Oryza nivara ONIVA09G09550 I 0.000
OPUNC08G13730 Oryza punctata OPUNC08G13730 I 0.000
orange1.1g022782m.g Citrus sinensis orange1.1g022782m.g I 0.000
orange1.1g024930m.g Citrus sinensis orange1.1g024930m.g N 0.000
orange1.1g026943m.g Citrus sinensis orange1.1g026943m.g I 0.000
orange1.1g037785m.g Citrus sinensis orange1.1g037785m.g I 0.000
ORGLA03G0109100 Oryza glaberrima ORGLA03G0109100 I 0.000
ORGLA08G0137400 Oryza glaberrima ORGLA08G0137400 I 0.000
ORUFI03G11650 Oryza rufipogon ORUFI03G11650 I 0.000
ORUFI08G17560 Oryza rufipogon ORUFI08G17560 I 0.000
ORUFI09G10670 Oryza rufipogon ORUFI09G10670 I 0.000
OS03G0260600 Oryza sativa OS03G0260600 I 0.000
OS08G0432800 Oryza sativa OS08G0432800 I 0.000
OS09G0410700 Oryza sativa OS09G0410700 I 0.000
Pavir.Ba01821 Panicum virgatum Pavir.Ba01821 N 0.000
Pavir.Bb02155 Panicum virgatum Pavir.Bb02155 N 0.000
Pavir.Ib01099 Panicum virgatum Pavir.Ib01099 I 0.000
PGSC0003DMG400000824 Solanum tuberosum PGSC0003DMG400000824 I 0.000
PGSC0003DMG400007457 Solanum tuberosum PGSC0003DMG400007457 I 0.000
PGSC0003DMG400023577 Solanum tuberosum PGSC0003DMG400023577 N 0.000
PK01498.1 Cannabis sativa PK01498.1 N 0.000
PK07858.1 Cannabis sativa PK07858.1 D 0.000
Pm002160 Prunus mume Pm002160 N 0.000
Pm029004 Prunus mume Pm029004 I 0.000
POPTR_0008s11490 Populus trichocarpa POPTR_0008s11490 I 0.000
POPTR_0010s14010 Populus trichocarpa POPTR_0010s14010 I 0.000
PRUPE_ppa019406mg Prunus persica PRUPE_ppa019406mg I 0.000
PRUPE_ppa019545mg Prunus persica PRUPE_ppa019545mg N 0.000
PRUPE_ppa026166mg Prunus persica PRUPE_ppa026166mg N 0.000
SapurV1A.0079s0530 Salix purpurea SapurV1A.0079s0530 I 0.000
SapurV1A.0304s0070 Salix purpurea SapurV1A.0304s0070 I 0.000
SapurV1A.3056s0010 Salix purpurea SapurV1A.3056s0010 I 0.000
Sb01g040450 Sorghum bicolor Sb01g040450 I 0.000
Sb02g024460 Sorghum bicolor Sb02g024460 N 0.000
Sb07g021170 Sorghum bicolor Sb07g021170 I 0.000
SELMODRAFT_412681 Selaginella moellendorffii SELMODRAFT_412681 I 0.000
SELMODRAFT_417246 Selaginella moellendorffii SELMODRAFT_417246 I 0.000
SELMODRAFT_46532 Selaginella moellendorffii SELMODRAFT_46532 I 0.000
SELMODRAFT_56610 Selaginella moellendorffii SELMODRAFT_56610 I 0.000
Si013911m.g Setaria italica Si013911m.g I 0.000
Si030496m.g Setaria italica Si030496m.g N 0.000
Si039730m.g Setaria italica Si039730m.g I 0.000
Solyc04g006990.2 Solanum lycopersicum Solyc04g006990.2 I 0.000
Solyc04g014360.2 Solanum lycopersicum Solyc04g014360.2 N 0.000
Solyc04g078690.2 Solanum lycopersicum Solyc04g078690.2 I 0.000
Solyc05g009880.2 Solanum lycopersicum Solyc05g009880.2 I 0.000
Solyc07g005400.2 Solanum lycopersicum Solyc07g005400.2 I 0.000
TCM_000997 Theobroma cacao TCM_000997 N 0.000
TCM_011873 Theobroma cacao TCM_011873 I 0.000
Thhalv10004524m.g Eutrema salsugineum Thhalv10004524m.g I 0.000
Thhalv10018758m.g Eutrema salsugineum Thhalv10018758m.g I 0.000
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I 0.000
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I 0.000
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I 0.000
Traes_5BL_CF90A7CAE Triticum aestivum Traes_5BL_CF90A7CAE N 0.000
TRIUR3_31897 Triticum urartu TRIUR3_31897 I 0.000
VIT_01s0011g02940 Vitis vinifera VIT_01s0011g02940 I 0.000
VIT_18s0001g07410 Vitis vinifera VIT_18s0001g07410 N 0.000