CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TOE3
(
Arabidopsis thaliana
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
AT5G67180
T000538_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.817
0.929
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.758
0.897
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD
HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.785
0.878
P93632_MAIZE
M09712_2.00
Zea mays
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.771
0.837
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G67180.1
AP2
95
144
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
AT5G67180.1
AP2
187
238
SKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGK
AT5G67180.2
AP2
95
144
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
AT5G67180.2
AP2
187
238
SKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGK
AT5G67180.3
AP2
95
144
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
AT5G67180.3
AP2
187
238
SKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARAYDKAAIKCNGK
AT5G67180.4
AP2
95
144
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
AT5G67180.4
AP2
187
227
SKYRGVTLHKCGRWESRLGQFLNKKYVYLGLFDTEIEAARY
Links
Other
AP2
family TFs
Other
Arabidopsis thaliana
TFs
236 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACEP26642
Atta cephalotes
ACEP26642
N
0.000
AFAF010393
Anopheles farauti
AFAF010393
N
0.000
AFUN009891
Anopheles funestus
AFUN009891
N
0.000
AMEM013442
Anopheles merus
AMEM013442
N
0.000
ANCCAN_09492
Ancylostoma caninum
ANCCAN_09492
N
0.000
ANCCEY_03110
Ancylostoma ceylanicum
ANCCEY_03110
N
0.000
ANCDUO_04788
Ancylostoma duodenale
ANCDUO_04788
N
0.000
ASTEI11512
Anopheles stephensi
ASTEI11512
N
0.000
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10960-processed-gene-0.0
I
0.000
BGIBMGA010273
Bombyx mori
BGIBMGA010273
N
0.000
Bm1891
Brugia malayi
Bm1891
N
0.000
BTMF_0001195401
Brugia timori
BTMF_0001195401
N
0.000
BXY_0663500
Bursaphelenchus xylophilus
BXY_0663500
N
0.000
CBG12337
Caenorhabditis briggsae
CBG12337
N
0.000
CBN07938
Caenorhabditis brenneri
CBN07938
N
0.000
Cflo_01219--XP_395512.3_APIME
Camponotus floridanus
Cflo_01219--XP_395512.3_APIME
N
0.000
CJA11729
Caenorhabditis japonica
CJA11729
N
0.000
CLEC012210
Cimex lectularius
CLEC012210
N
0.000
CRE29533
Caenorhabditis remanei
CRE29533
N
0.000
D918_04368
Trichuris suis
D918_04368
N
0.000
DAPPUDRAFT_327651
Daphnia pulex
DAPPUDRAFT_327651
N
0.000
DME_0001005001
Dracunculus medinensis
DME_0001005001
N
0.000
EEL_0001008901
Elaeophora elaphi
EEL_0001008901
N
0.000
EVEC_0000024601
Enterobius vermicularis
EVEC_0000024601
N
0.000
GA26236
Drosophila pseudoobscura
FBgn0247610
N
0.000
GB44899
Apis mellifera
GB44899
N
0.000
GF23141
Drosophila ananassae
FBgn0100135
N
0.000
GG16758
Drosophila erecta
FBgn0108988
N
0.000
GH15872
Drosophila grimshawi
FBgn0123343
N
0.000
GI23637
Drosophila mojavensis
FBgn0146363
N
0.000
GJ24712
Drosophila virilis
FBgn0211788
N
0.000
GK22507
Drosophila willistoni
FBgn0224484
N
0.000
GM15347
Drosophila sechellia
FBgn0170267
N
0.000
GPLIN_000077900
Globodera pallida
GPLIN_000077900
N
0.000
GPUH_0000112301
Gongylonema pulchrum
GPUH_0000112301
N
0.000
HCOI00324200
Haemonchus contortus
HCOI00324200
N
0.000
HHAL005964-PA
Halyomorpha halys
HHAL005964-PA
N
0.000
HPBE_0000983501
Heligmosomoides bakeri
HPBE_0000983501
N
0.000
HPLM_0000291901
Haemonchus placei
HPLM_0000291901
N
0.000
Hsal_01939--XP_395512.3_APIME
Harpegnathos saltator
Hsal_01939--XP_395512.3_APIME
N
0.000
ISCW014189
Ixodes scapularis
ISCW014189
I
0.000
KGM_12579
Danaus plexippus
KGM_12579
N
0.000
L596_g4117
Steinernema carpocapsae
L596_g4117
N
0.000
L889_g180
Steinernema feltiae
L889_g180
N
0.000
L892_g19705
Steinernema scapterisci
L892_g19705
N
0.000
L893_g29191
Steinernema glaseri
L893_g29191
N
0.000
L898_g7337
Steinernema monticolum
L898_g7337
N
0.000
LCUP015823
Lucilia cuprina
LCUP015823
N
0.000
let-526
Caenorhabditis elegans
WBGene00002717
N
0.000
LOAG_17326
Loa loa
LOAG_17326
N
0.000
MhA1_Contig163.frz3.gene26
Meloidogyne hapla
MhA1_Contig163.frz3.gene26
I
0.000
nAv.1.0.1.g00338
Acanthocheilonema viteae
nAv.1.0.1.g00338
N
0.000
NBR_0002081701
Nippostrongylus brasiliensis
NBR_0002081701
N
0.000
nDi.2.2.2.g04479
Dirofilaria immitis
nDi.2.2.2.g04479
N
0.000
NECAME_01002
Necator americanus
NECAME_01002
N
0.000
nLs.2.1.2.g09434
Litomosoides sigmodontis
nLs.2.1.2.g09434
N
0.000
nOo.2.0.1.g08403
Onchocerca ochengi
nOo.2.0.1.g08403
N
0.000
OESDEN_04600
Oesophagostomum dentatum
OESDEN_04600
N
0.000
OFLC_0001383401
Onchocerca flexuosa
OFLC_0001383401
N
0.000
osa
Drosophila melanogaster
FBgn0261885
N
0.000
osa
Drosophila yakuba
FBgn0041640
N
0.000
PEQ_0000742201
Parascaris equorum
PEQ_0000742201
N
0.000
PHUM080380
Pediculus humanus
PHUM080380
N
0.000
PPAI002183
Phlebotomus papatasi
PPAI002183
N
0.000
PTRK_0001699800
Parastrongyloides trichosuri
PTRK_0001699800
N
0.000
RSKR_0000271300
Rhabditophanes kr3021
RSKR_0000271300
N
0.000
SBAD_0000668001
Soboliphyme baturini
SBAD_0000668001
N
0.000
scaffold2015-EXSNAP2012.2
Pristionchus exspectatus
scaffold2015-EXSNAP2012.2
N
0.000
SINV22763
Solenopsis invicta
SINV22763
N
0.000
SMAR006121
Strigamia maritima
SMAR006121
I
0.000
SMU15038692
Schmidtea mediterranea
SMU15038692
N
0.000
SPAL_0001124500
Strongyloides papillosus
SPAL_0001124500
N
0.000
SSTP_0000977600
Strongyloides stercoralis
SSTP_0000977600
N
0.000
SVE_1830100
Strongyloides venezuelensis
SVE_1830100
N
0.000
TC013586
Tribolium castaneum
TC013586
N
0.000
TCLT_0000619901
Thelazia callipaeda
TCLT_0000619901
N
0.000
TCNE_0000128301
Toxocara canis
TCNE_0000128301
N
0.000
TELCIR_03263
Teladorsagia circumcincta
TELCIR_03263
N
0.000
TMUE_s0224000200
Trichuris muris
TMUE_s0224000200
N
0.000
WBGene00237224
Onchocerca volvulus
WBGene00237224
N
0.000
WUBG_00477
Wuchereria bancrofti
WUBG_00477
N
0.000
YQE_09239
Dendroctonus ponderosae
YQE_09239
N
0.000