BGIOSGA020923 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA020923 T000636_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.810 0.941
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.754 0.843
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.754 0.843
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA020923-PA AP2 6 57

Links

Other AP2 family TFs
Other Oryza indica TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC149818.2_FG009 Zea mays AC149818.2_FG009 I 0.000
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I 0.000
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.000
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.000
BGIOSGA011866 Oryza indica BGIOSGA011866 I 0.000
Bo8g092560 Brassica oleracea Bo8g092560 I 0.000
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.000
Bra014581 Brassica rapa Bra014581 I 0.000
Bra016876 Brassica rapa Bra016876 N 0.000
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.000
BRADI1G75120 Brachypodium distachyon BRADI1G75120 N 0.000
BRADI3G12550 Brachypodium distachyon BRADI3G12550 I 0.000
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I 0.000
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.000
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.000
Ca_12214 Cicer arietinum Ca_12214 I 0.000
evm.TU.supercontig_331.6 Carica papaya evm.TU.supercontig_331.6 I 0.000
F775_22967 Aegilops tauschii F775_22967 I 0.000
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.000
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.000
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.000
GRMZM2G092483 Zea mays GRMZM2G092483 I 0.000
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.000
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I 0.000
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.000
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.000
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.000
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.000
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.000
LBD29 Arabidopsis thaliana AT3G58190 I 0.000
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.000
LPERR03G03460 Leersia perrieri LPERR03G03460 I 0.000
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.000
MLOC_10783 Hordeum vulgare MLOC_10783 N 0.000
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.000
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.000
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.000
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.000
OB02G44330 Oryza brachyantha OB02G44330 I 0.000
OB03G13880 Oryza brachyantha OB03G13880 I 0.000
OB03G13890 Oryza brachyantha OB03G13890 I 0.000
OBART03G03820 Oryza barthii OBART03G03820 I 0.000
OBART03G03830 Oryza barthii OBART03G03830 I 0.000
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.000
OGLUM03G03700 Oryza glumaepatula OGLUM03G03700 I 0.000
OLONG_020840 Oryza longistaminata OLONG_020840 N 0.000
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.000
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.000
OMERI07G01670 Oryza meridionalis OMERI07G01670 N 0.000
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.000
ONIVA03G03570 Oryza nivara ONIVA03G03570 I 0.000
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.000
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.000
OPUNC03G03510 Oryza punctata OPUNC03G03510 I 0.000
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.000
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.000
ORGLA03G0035800 Oryza glaberrima ORGLA03G0035800 I 0.000
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.000
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.000
ORUFI03G03540 Oryza rufipogon ORUFI03G03540 I 0.000
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.000
OS02G0820500 Oryza sativa OS02G0820500 I 0.000
OS03G0149000 Oryza sativa OS03G0149000 I 0.000
OS03G0149100 Oryza sativa OS03G0149100 I 0.000
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.000
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.000
Pavir.Ib00282 Panicum virgatum Pavir.Ib00282 I 0.000
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.000
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.000
Pavir.J24246 Panicum virgatum Pavir.J24246 I 0.000
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.000
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.000
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.000
Sb01g047000 Sorghum bicolor Sb01g047000 I 0.000
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.000
Si019578m.g Setaria italica Si019578m.g I 0.000
Si037727m.g Setaria italica Si037727m.g I 0.000
Si040019m.g Setaria italica Si040019m.g I 0.000
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.000
Traes_4AL_3BA1D51E2 Triticum aestivum Traes_4AL_3BA1D51E2 N 0.000
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.000
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.000
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I 0.000
Traes_4BS_B43A99154 Triticum aestivum Traes_4BS_B43A99154 N 0.000
Traes_4DL_05F87867C Triticum aestivum Traes_4DL_05F87867C N 0.000
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.000
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.000
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.000
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.000
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.000
TRIUR3_07751 Triticum urartu TRIUR3_07751 I 0.000