Bra003462 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra003462 T000999_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRF4
M01626_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8261 		0.684 0.740
CRF4
M06645_2.00 		Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN
NRGHDDHDGYGGCGGCGGHKV		 Dap-seq
OMalley et al.(2016)
CRF4_col_a 		0.684 0.740
CRF4
M06646_2.00 		Arabidopsis thaliana
YCDYCGCCGCCGYYD
HRRCGGCGGCGRHGR		 Dap-seq
OMalley et al.(2016)
CRF4_colamp_a 		0.684 0.740
CRF3
M01633_2.00 		Arabidopsis thaliana
NNGCCRNNN
NNNYGGCNN		 PBM
Weirauch et al.(2014)
pTH8110 		0.677 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra003462.1-P AP2 101 152

Links

Other AP2 family TFs
Other Brassica rapa TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_06861 Capronia coronata A1O1_06861 I 0.000
A1O3_10315 Capronia epimyces A1O3_10315 I 0.000
A1O5_07631 Cladophialophora psammophila A1O5_07631 I 0.000
A1O7_09958 Cladophialophora yegresii A1O7_09958 I 0.000
AB00260.1 Alternaria brassicicola AB00260.1 I 0.000
ACLA_040020 Aspergillus clavatus CADACLAG00003199 I 0.000
AOL_s00075g18 Arthrobotrys oligospora AOL_s00075g18 I 0.000
ATEG_04171 Aspergillus terreus CADATEAG00009984 D 0.000
AUEXF2481DRAFT_40998 Aureobasidium subglaciale AUEXF2481DRAFT_40998 I 0.000
BBA_00148 Beauveria bassiana BBA_00148 I 0.000
BDDG_04023 Blastomyces dermatitidis BDDG_04023 I 0.000
BN7_6497 Wickerhamomyces ciferrii BN7_6497 I 0.000
CADAFLAG00002414 Aspergillus flavus CADAFLAG00002414 I 0.000
CADANGAG00002342 Aspergillus niger CADANGAG00002342 I 0.000
CADAORAG00001369 Aspergillus oryzae CADAORAG00001369 I 0.000
CCM_06184 Cordyceps militaris CCM_06184 I 0.000
CFIO01_01433 Colletotrichum fioriniae CFIO01_01433 I 0.000
CGGC5_5664 Colletotrichum gloeosporioides CGGC5_5664 I 0.000
CH063_05074 Colletotrichum higginsianum CH063_05074 I 0.000
CIMG_09634 Coccidioides immitis CIMG_09634 I 0.000
CLUG_04271 Candida lusitaniae CLUG_04271 I 0.000
CLUG_04271 Clavispora lusitaniae CLUG_04271 I 0.000
Cob_03876 Colletotrichum orbiculare Cob_03876 I 0.000
COCC4DRAFT_127765 Bipolaris maydis COCC4DRAFT_127765 I 0.000
COCCADRAFT_90442 Bipolaris zeicola COCCADRAFT_90442 I 0.000
COCMIDRAFT_2266 Bipolaris oryzae COCMIDRAFT_2266 I 0.000
COCSADRAFT_125307 Bipolaris sorokiniana COCSADRAFT_125307 I 0.000
COCVIDRAFT_88516 Bipolaris victoriae COCVIDRAFT_88516 I 0.000
CPC735_023880 Coccidioides posadasii CPC735_023880 I 0.000
CPUR_03335 Claviceps purpurea CPUR_03335 I 0.000
CSUB01_02498 Colletotrichum sublineola CSUB01_02498 I 0.000
CTHT_0056810 Chaetomium thermophilum CTHT_0056810 I 0.000
DOTSEDRAFT_142040 Dothistroma septosporum DOTSEDRAFT_142040 I 0.000
DRE_07453 Drechslerella stenobrocha DRE_07453 I 0.000
EPUS_07220 Endocarpon pusillum EPUS_07220 I 0.000
estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 Nectria haematococca estExt_fgenesh1_pg.C_sca_1_chr1_3_00273 I 0.000
estExt_fgenesh3_pm.C_70282 Neurospora discreta estExt_fgenesh3_pm.C_70282 I 0.000
estExt_Genewise1.C_11468 Cochliobolus heterostrophus C5 estExt_Genewise1.C_11468 I 0.000
EURHEDRAFT_516147 Aspergillus ruber EURHEDRAFT_516147 I 0.000
F503_07224 Ophiostoma piceae uamh F503_07224 I 0.000
FFUJ_01281 Fusarium fujikuroi FFUJ_01281 I 0.000
fgenesh1_pm.00866_#_491 Aspergillus carbonarius fgenesh1_pm.00866_#_491 I 0.000
fgenesh1_pm.C_scaffold_5000435 Cryphonectria parasitica fgenesh1_pm.C_scaffold_5000435 I 0.000
FOXG_00297 Fusarium oxysporum FOXG_00297 I 0.000
FPSE_09056 Fusarium pseudograminearum FPSE_09056 I 0.000
FVEG_01221 Fusarium verticillioides FVEG_01221 I 0.000
G647_08323 Cladophialophora carrionii G647_08323 I 0.000
GGTG_12202 Gaeumannomyces graminis GGTG_12202 I 0.000
GLRG_04370 Colletotrichum graminicola GLRG_04370 I 0.000
GMDG_01589 Pseudogymnoascus destructans GMDG_01589 I 0.000
GSTUM_00011138001 Tuber melanosporum GSTUM_00011138001 I 0.000
H072_1197 Dactylellina haptotyla H072_1197 I 0.000
H101_06850 Trichophyton interdigitale H101_06850 I 0.000
H102_08770 Trichophyton rubrum H102_08770 I 0.000
H105_08795 Trichophyton soudanense H105_08795 I 0.000
HCBG_03004 Histoplasma capsulatum HCBG_03004 I 0.000
HMPREF1120_01778 Exophiala dermatitidis HMPREF1120_01778 I 0.000
HMPREF1541_02811 Cyphellophora europaea HMPREF1541_02811 I 0.000
HMPREF1624_00506 Sporothrix schenckii HMPREF1624_00506 I 0.000
J056_000182 Wallemia ichthyophaga J056_000182 I 0.000
KLLA0_B01584g Kluyveromyces lactis KLLA0_B01584g I 0.000
KUCA_T00000773001 Kuraishia capsulata KUCA_T00000773001 I 0.000
LEMA_P079180.1 Leptosphaeria maculans LEMA_P079180.1 I 0.000
M407DRAFT_21315 Tulasnella calospora M407DRAFT_21315 I 0.000
M437DRAFT_82573 Aureobasidium melanogenum M437DRAFT_82573 I 0.000
M438DRAFT_345498 Aureobasidium pullulans M438DRAFT_345498 I 0.000
MAC_05257 Metarhizium acridum MAC_05257 I 0.000
MAJ_02218 Metarhizium majus MAJ_02218 I 0.000
MAM_06825 Metarhizium album MAM_06825 I 0.000
MANI_109748 Metarhizium anisopliae MANI_109748 I 0.000
MAPG_09676 Magnaporthe poae MAPG_09676 I 0.000
MBR_03692 Metarhizium brunneum MBR_03692 I 0.000
MCYG_03024 Microsporum canis MCYG_03024 I 0.000
MGG_11712 Magnaporthe oryzae MGG_11712 I 0.000
MGU_04884 Metarhizium guizhouense MGU_04884 I 0.000
MGYG_00197 Microsporum gypseum MGYG_00197 I 0.000
MPH_01872 Macrophomina phaseolina MPH_01872 I 0.000
NCU03266 Neurospora crassa NCU03266 D 0.000
NechaG98757 Fusarium solani NechaG98757 I 0.000
NEUTE1DRAFT_133183 Neurospora tetrasperma NEUTE1DRAFT_133183 I 0.000
PAAG_11867 Paracoccidioides sp lutzii PAAG_11867 I 0.000
PABG_04211 Paracoccidioides brasiliensis PABG_04211 I 0.000
Pc18g00190 Penicillium chrysogenum Pc18g00190 I 0.000
PCH_Pc18g00190 Penicillium rubens PCH_Pc18g00190 I 0.000
PDE_04931 Penicillium oxalicum PDE_04931 I 0.000
PDIP_75510 Penicillium digitatum PDIP_75510 I 0.000
PEX1_077160 Penicillium expansum PEX1_077160 I 0.000
PFICI_01897 Pestalotiopsis fici PFICI_01897 I 0.000
PITC_036250 Penicillium italicum PITC_036250 I 0.000
PMAA_076490 Talaromyces marneffei PMAA_076490 I 0.000
PMAA_076490 Penicillium marneffei PMAA_076490 I 0.000
PNEG_03146 Pneumocystis murina PNEG_03146 I 0.000
PODANS_1_2230 Podospora anserina PODANS_1_2230 I 0.000
PredSwiss_CON591.1 Pneumocystis carinii PredSwiss_CON591.1 I 0.000
PV04_10601 Capronia semiimmersa PV04_10601 I 0.000
PV05_02773 Exophiala xenobiotica PV05_02773 I 0.000
PV06_07195 Exophiala oligosperma PV06_07195 I 0.000
PV07_12240 Cladophialophora immunda PV07_12240 I 0.000
PV08_06661 Exophiala spinifera PV08_06661 I 0.000
PV09_05311 Verruconis gallopava PV09_05311 I 0.000
PV10_01019 Exophiala mesophila PV10_01019 I 0.000
PV11_06012 Exophiala sideris PV11_06012 I 0.000
PVAR5_3236 Byssochlamys spectabilis PVAR5_3236 I 0.000
S40285_01877 Stachybotrys chlorohalonata S40285_01877 I 0.000
S40288_08800 Stachybotrys chartarum S40288_08800 I 0.000
SAPIO_CDS3097 Scedosporium apiospermum SAPIO_CDS3097 I 0.000
SETTUDRAFT_126230 Setosphaeria turcica SETTUDRAFT_126230 I 0.000
SMAC_02983 Sordaria macrospora SMAC_02983 I 0.000
SNOG_10542 Stagonospora nodorum SNOG_10542 I 0.000
SNOG_10542 Phaeosphaeria nodorum SNOG_10542 I 0.000
SPBR_06725 Sporothrix brasiliensis SPBR_06725 I 0.000
TBLA_0D01390 Tetrapisispora blattae TBLA_0D01390 I 0.000
TEQG_06412 Trichophyton equinum TEQG_06412 I 0.000
TESG_00798 Trichophyton tonsurans TESG_00798 I 0.000
TRIREDRAFT_57059 Trichoderma reesei TRIREDRAFT_57059 I 0.000
TRIVIDRAFT_42882 Trichoderma virens TRIVIDRAFT_42882 I 0.000
TSTA_096850 Talaromyces stipitatus TSTA_096850 I 0.000
U727_00433932271 Penicillium solitum U727_00433932271 I 0.000
UREG_04594 Uncinocarpus reesii UREG_04594 I 0.000
UV8b_5567 Ustilaginoidea virens UV8b_5567 I 0.000
V499_00333 Pseudogymnoascus pannorum V499_00333 I 0.000
VDAG_03007 Verticillium dahliae VDAG_03007 I 0.000
VDBG_05845 Verticillium albo atrum VDBG_05845 I 0.000
VDBG_05845 Verticillium alfalfae VDBG_05845 I 0.000
VHEMI06514 Torrubiella hemipterigena VHEMI06514 I 0.000
X797_003774 Metarhizium robertsii X797_003774 I 0.000
Z517_12283 Fonsecaea pedrosoi Z517_12283 I 0.000
Z518_06261 Rhinocladiella mackenziei Z518_06261 I 0.000
Z519_06193 Cladophialophora bantiana Z519_06193 I 0.000