GLYMA06G17180 (Glycine max)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GLYMA06G17180 T001813_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.831 0.940
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.831 0.940
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.792 0.860
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.792 0.860
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.792 0.860
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.792 0.860
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.773 0.920
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.723 0.820
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.723 0.820
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.723 0.820
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.705 0.800
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.703 0.780
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.699 0.740
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.698 0.760
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.695 0.800
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.695 0.800
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.695 0.760
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.695 0.760
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.695 0.760
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.693 0.720
ABR1
M01051_2.00 		Arabidopsis thaliana
NYGSCGSCVNN
NNBGSCGSCRN		 PBM
Sullivan et al.(2014)
pTH7383 		0.690 0.780
ABR1
M06684_2.00 		Arabidopsis thaliana
CKCCGCCGYMDHHNYHNHH
DDNDRNDDHKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ABR1_col_a 		0.690 0.780
ABR1
M06685_2.00 		Arabidopsis thaliana
HNNHDSCGCCGCMAWHNNNNN
NNNNNDWTKGCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ABR1_colamp_a 		0.690 0.780
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.689 0.800
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.689 0.800
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.689 0.800
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.677 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA06G17180.2 AP2 85 136

Links

Other AP2 family TFs
Other Glycine max TFs

671 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_011_00570 Aquilegia coerulea Aquca_011_00570 N 0.000
cassava25868.m1 Manihot esculenta cassava25868.m1 I 0.000
cassava2804.m1 Manihot esculenta cassava2804.m1 N 0.000
cassava31571.valid.m1 Manihot esculenta cassava31571.valid.m1 N 0.000
cassava33302.m1 Manihot esculenta cassava33302.m1 I 0.000
cassava9944.m1 Manihot esculenta cassava9944.m1 I 0.000
Ca_12762 Cicer arietinum Ca_12762 N 0.000
Ciclev10009521m.g Citrus clementina Ciclev10009521m.g N 0.000
Cla012784 Citrullus lanatus Cla012784 N 0.000
Cucsa.340790 Cucumis sativus Cucsa.340790 N 0.000
Eucgr.B01869 Eucalyptus grandis Eucgr.B01869 I 0.000
Eucgr.B01964 Eucalyptus grandis Eucgr.B01964 I 0.000
Eucgr.C00725 Eucalyptus grandis Eucgr.C00725 I 0.000
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.000
Eucgr.D02099 Eucalyptus grandis Eucgr.D02099 N 0.000
Eucgr.E00407 Eucalyptus grandis Eucgr.E00407 N 0.000
Eucgr.F04422 Eucalyptus grandis Eucgr.F04422 N 0.000
Eucgr.F04423 Eucalyptus grandis Eucgr.F04423 N 0.000
evm.TU.supercontig_126.30 Carica papaya evm.TU.supercontig_126.30 N 0.000
evm.TU.supercontig_25.115 Carica papaya evm.TU.supercontig_25.115 N 0.000
evm.TU.supercontig_46.144 Carica papaya evm.TU.supercontig_46.144 N 0.000
F775_17212 Aegilops tauschii F775_17212 I 0.000
F775_19148 Aegilops tauschii F775_19148 I 0.000
gene07418-v1.0-hybrid Fragaria vesca gene07418-v1.0-hybrid N 0.000
gene08880-v1.0-hybrid Fragaria vesca gene08880-v1.0-hybrid N 0.000
GLYMA01G41610 Glycine max GLYMA01G41610 N 0.000
GLYMA05G04900 Glycine max GLYMA05G04900 I 0.000
GLYMA11G03770 Glycine max GLYMA11G03770 N 0.000
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.000
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.000
GLYMA17G15270 Glycine max GLYMA17G15270 I 0.000
Gorai.004G196800 Gossypium raimondii Gorai.004G196800 N 0.000
Gorai.009G040800 Gossypium raimondii Gorai.009G040800 N 0.000
Gorai.009G040900 Gossypium raimondii Gorai.009G040900 N 0.000
Gorai.009G146500 Gossypium raimondii Gorai.009G146500 N 0.000
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.000
Gorai.010G096800 Gossypium raimondii Gorai.010G096800 N 0.000
Gorai.012G011700 Gossypium raimondii Gorai.012G011700 N 0.000
GSMUA_Achr11G23500_001 Musa acuminata GSMUA_Achr11G23500_001 N 0.000
GSMUA_Achr2G17960_001 Musa acuminata GSMUA_Achr2G17960_001 N 0.000
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.000
MDP0000124555 Malus domestica MDP0000124555 N 0.000
MDP0000133817 Malus domestica MDP0000133817 I 0.000
MDP0000140609 Malus domestica MDP0000140609 I 0.000
MDP0000143276 Malus domestica MDP0000143276 I 0.000
MDP0000226215 Malus domestica MDP0000226215 N 0.000
MDP0000253904 Malus domestica MDP0000253904 N 0.000
MDP0000261265 Malus domestica MDP0000261265 I 0.000
MDP0000887107 Malus domestica MDP0000887107 I 0.000
MDP0000931057 Malus domestica MDP0000931057 N 0.000
mgf018735m Mimulus guttatus mgf018735m N 0.000
mgf024953m Mimulus guttatus mgf024953m N 0.000
MTR_4g100720 Medicago truncatula MTR_4g100720 N 0.000
orange1.1g028843m.g Citrus sinensis orange1.1g028843m.g N 0.000
orange1.1g028922m.g Citrus sinensis orange1.1g028922m.g N 0.000
Pm005573 Prunus mume Pm005573 I 0.000
Pm005577 Prunus mume Pm005577 I 0.000
Pm013277 Prunus mume Pm013277 N 0.000
Pm023419 Prunus mume Pm023419 N 0.000
POPTR_0001s16970 Populus trichocarpa POPTR_0001s16970 N 0.000
POPTR_0003s06320 Populus trichocarpa POPTR_0003s06320 N 0.000
POPTR_0003s07680 Populus trichocarpa POPTR_0003s07680 N 0.000
POPTR_0006s23780 Populus trichocarpa POPTR_0006s23780 I 0.000
POPTR_0018s08500 Populus trichocarpa POPTR_0018s08500 N 0.000
PRUPE_ppa015883mg Prunus persica PRUPE_ppa015883mg I 0.000
PRUPE_ppa016135mg Prunus persica PRUPE_ppa016135mg N 0.000
PRUPE_ppa024533mg Prunus persica PRUPE_ppa024533mg N 0.000
PRUPE_ppa026916mg Prunus persica PRUPE_ppa026916mg I 0.000
SapurV1A.0002s0910 Salix purpurea SapurV1A.0002s0910 N 0.000
SapurV1A.0177s0330 Salix purpurea SapurV1A.0177s0330 N 0.000
SapurV1A.0177s0340 Salix purpurea SapurV1A.0177s0340 N 0.000
SapurV1A.0435s0070 Salix purpurea SapurV1A.0435s0070 N 0.000
SapurV1A.0710s0030 Salix purpurea SapurV1A.0710s0030 I 0.000
SapurV1A.1087s0090 Salix purpurea SapurV1A.1087s0090 N 0.000
SapurV1A.1360s0110 Salix purpurea SapurV1A.1360s0110 N 0.000
SapurV1A.4052s0010 Salix purpurea SapurV1A.4052s0010 N 0.000
TCM_015933 Theobroma cacao TCM_015933 I 0.000
TCM_029126 Theobroma cacao TCM_029126 N 0.000
TCM_037383 Theobroma cacao TCM_037383 I 0.000
Traes_4DL_26A958CDD Triticum aestivum Traes_4DL_26A958CDD I 0.000
Traes_4DL_8A9D9ACCB Triticum aestivum Traes_4DL_8A9D9ACCB I 0.000
TRIUR3_09734 Triticum urartu TRIUR3_09734 I 0.000
VIT_00s0341g00050 Vitis vinifera VIT_00s0341g00050 N 0.000
VIT_04s0008g01870 Vitis vinifera VIT_04s0008g01870 I 0.000
VIT_09s0002g01380 Vitis vinifera VIT_09s0002g01380 N 0.000