OBART02G18470 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART02G18470 T003084_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.789 0.880
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.789 0.880
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.752 0.820
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.752 0.820
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.752 0.820
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.752 0.820
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.723 0.840
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.697 0.820
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.697 0.820
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.697 0.820
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.688 0.760
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.688 0.760
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.688 0.760
P93392_TOBAC
M09731_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OPBP1_01 		0.687 0.700
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.687 0.740
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.684 0.720
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.684 0.720
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.683 0.700
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.683 0.700
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.682 0.720
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.682 0.720
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.679 0.720
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.678 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G18470.1 AP2 85 136

Links

Other AP2 family TFs
Other Oryza barthii TFs

746 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_000030 Trichomonas vaginalis TVAG_000030 N 0.000
TVAG_001330 Trichomonas vaginalis TVAG_001330 N 0.000
TVAG_007040 Trichomonas vaginalis TVAG_007040 N 0.000
TVAG_008440 Trichomonas vaginalis TVAG_008440 N 0.000
TVAG_009880 Trichomonas vaginalis TVAG_009880 N 0.000
TVAG_011920 Trichomonas vaginalis TVAG_011920 N 0.000
TVAG_012150 Trichomonas vaginalis TVAG_012150 N 0.000
TVAG_015720 Trichomonas vaginalis TVAG_015720 N 0.000
TVAG_018850 Trichomonas vaginalis TVAG_018850 N 0.000
TVAG_019920 Trichomonas vaginalis TVAG_019920 N 0.000
TVAG_020730 Trichomonas vaginalis TVAG_020730 N 0.000
TVAG_023760 Trichomonas vaginalis TVAG_023760 N 0.000
TVAG_031600 Trichomonas vaginalis TVAG_031600 N 0.000
TVAG_032030 Trichomonas vaginalis TVAG_032030 N 0.000
TVAG_034280 Trichomonas vaginalis TVAG_034280 N 0.000
TVAG_037740 Trichomonas vaginalis TVAG_037740 N 0.000
TVAG_039390 Trichomonas vaginalis TVAG_039390 N 0.000
TVAG_039550 Trichomonas vaginalis TVAG_039550 N 0.000
TVAG_043230 Trichomonas vaginalis TVAG_043230 N 0.000
TVAG_059800 Trichomonas vaginalis TVAG_059800 N 0.000
TVAG_061750 Trichomonas vaginalis TVAG_061750 N 0.000
TVAG_063960 Trichomonas vaginalis TVAG_063960 N 0.000
TVAG_069660 Trichomonas vaginalis TVAG_069660 N 0.000
TVAG_073020 Trichomonas vaginalis TVAG_073020 N 0.000
TVAG_074110 Trichomonas vaginalis TVAG_074110 N 0.000
TVAG_078240 Trichomonas vaginalis TVAG_078240 N 0.000
TVAG_078430 Trichomonas vaginalis TVAG_078430 N 0.000
TVAG_084650 Trichomonas vaginalis TVAG_084650 N 0.000
TVAG_085930 Trichomonas vaginalis TVAG_085930 N 0.000
TVAG_086370 Trichomonas vaginalis TVAG_086370 N 0.000
TVAG_086900 Trichomonas vaginalis TVAG_086900 N 0.000
TVAG_089480 Trichomonas vaginalis TVAG_089480 N 0.000
TVAG_091390 Trichomonas vaginalis TVAG_091390 N 0.000
TVAG_093130 Trichomonas vaginalis TVAG_093130 N 0.000
TVAG_096910 Trichomonas vaginalis TVAG_096910 N 0.000
TVAG_100210 Trichomonas vaginalis TVAG_100210 N 0.000
TVAG_104600 Trichomonas vaginalis TVAG_104600 N 0.000
TVAG_106270 Trichomonas vaginalis TVAG_106270 N 0.000
TVAG_127100 Trichomonas vaginalis TVAG_127100 N 0.000
TVAG_131670 Trichomonas vaginalis TVAG_131670 N 0.000
TVAG_131940 Trichomonas vaginalis TVAG_131940 N 0.000
TVAG_132110 Trichomonas vaginalis TVAG_132110 N 0.000
TVAG_132840 Trichomonas vaginalis TVAG_132840 N 0.000
TVAG_133550 Trichomonas vaginalis TVAG_133550 N 0.000
TVAG_135590 Trichomonas vaginalis TVAG_135590 N 0.000
TVAG_135820 Trichomonas vaginalis TVAG_135820 N 0.000
TVAG_142090 Trichomonas vaginalis TVAG_142090 N 0.000
TVAG_144220 Trichomonas vaginalis TVAG_144220 N 0.000
TVAG_144940 Trichomonas vaginalis TVAG_144940 N 0.000
TVAG_144990 Trichomonas vaginalis TVAG_144990 N 0.000
TVAG_147450 Trichomonas vaginalis TVAG_147450 N 0.000
TVAG_148150 Trichomonas vaginalis TVAG_148150 N 0.000
TVAG_152980 Trichomonas vaginalis TVAG_152980 N 0.000
TVAG_161880 Trichomonas vaginalis TVAG_161880 N 0.000
TVAG_163090 Trichomonas vaginalis TVAG_163090 N 0.000
TVAG_165780 Trichomonas vaginalis TVAG_165780 N 0.000
TVAG_165880 Trichomonas vaginalis TVAG_165880 N 0.000
TVAG_165930 Trichomonas vaginalis TVAG_165930 N 0.000
TVAG_169420 Trichomonas vaginalis TVAG_169420 N 0.000
TVAG_173550 Trichomonas vaginalis TVAG_173550 N 0.000
TVAG_175140 Trichomonas vaginalis TVAG_175140 N 0.000
TVAG_176820 Trichomonas vaginalis TVAG_176820 N 0.000
TVAG_178970 Trichomonas vaginalis TVAG_178970 N 0.000
TVAG_180740 Trichomonas vaginalis TVAG_180740 N 0.000
TVAG_189330 Trichomonas vaginalis TVAG_189330 N 0.000
TVAG_189910 Trichomonas vaginalis TVAG_189910 N 0.000
TVAG_192190 Trichomonas vaginalis TVAG_192190 N 0.000
TVAG_193830 Trichomonas vaginalis TVAG_193830 N 0.000
TVAG_195150 Trichomonas vaginalis TVAG_195150 N 0.000
TVAG_196040 Trichomonas vaginalis TVAG_196040 N 0.000
TVAG_196090 Trichomonas vaginalis TVAG_196090 N 0.000
TVAG_197560 Trichomonas vaginalis TVAG_197560 N 0.000
TVAG_202380 Trichomonas vaginalis TVAG_202380 N 0.000
TVAG_209740 Trichomonas vaginalis TVAG_209740 N 0.000
TVAG_212170 Trichomonas vaginalis TVAG_212170 N 0.000
TVAG_213940 Trichomonas vaginalis TVAG_213940 N 0.000
TVAG_218340 Trichomonas vaginalis TVAG_218340 N 0.000
TVAG_218910 Trichomonas vaginalis TVAG_218910 N 0.000
TVAG_219060 Trichomonas vaginalis TVAG_219060 N 0.000
TVAG_220700 Trichomonas vaginalis TVAG_220700 N 0.000
TVAG_223910 Trichomonas vaginalis TVAG_223910 N 0.000
TVAG_229000 Trichomonas vaginalis TVAG_229000 N 0.000
TVAG_229790 Trichomonas vaginalis TVAG_229790 N 0.000
TVAG_231510 Trichomonas vaginalis TVAG_231510 N 0.000
TVAG_231960 Trichomonas vaginalis TVAG_231960 N 0.000
TVAG_233540 Trichomonas vaginalis TVAG_233540 N 0.000
TVAG_240890 Trichomonas vaginalis TVAG_240890 N 0.000
TVAG_247790 Trichomonas vaginalis TVAG_247790 N 0.000
TVAG_248770 Trichomonas vaginalis TVAG_248770 N 0.000
TVAG_253450 Trichomonas vaginalis TVAG_253450 N 0.000
TVAG_256950 Trichomonas vaginalis TVAG_256950 N 0.000
TVAG_263380 Trichomonas vaginalis TVAG_263380 N 0.000
TVAG_268540 Trichomonas vaginalis TVAG_268540 N 0.000
TVAG_268940 Trichomonas vaginalis TVAG_268940 N 0.000
TVAG_272290 Trichomonas vaginalis TVAG_272290 N 0.000
TVAG_279630 Trichomonas vaginalis TVAG_279630 N 0.000
TVAG_281270 Trichomonas vaginalis TVAG_281270 N 0.000
TVAG_283440 Trichomonas vaginalis TVAG_283440 N 0.000
TVAG_283940 Trichomonas vaginalis TVAG_283940 N 0.000
TVAG_294600 Trichomonas vaginalis TVAG_294600 N 0.000
TVAG_301510 Trichomonas vaginalis TVAG_301510 N 0.000
TVAG_303220 Trichomonas vaginalis TVAG_303220 N 0.000
TVAG_305200 Trichomonas vaginalis TVAG_305200 N 0.000
TVAG_307610 Trichomonas vaginalis TVAG_307610 N 0.000
TVAG_313480 Trichomonas vaginalis TVAG_313480 N 0.000
TVAG_313570 Trichomonas vaginalis TVAG_313570 N 0.000
TVAG_315480 Trichomonas vaginalis TVAG_315480 N 0.000
TVAG_317430 Trichomonas vaginalis TVAG_317430 N 0.000
TVAG_320380 Trichomonas vaginalis TVAG_320380 N 0.000
TVAG_320500 Trichomonas vaginalis TVAG_320500 N 0.000
TVAG_322370 Trichomonas vaginalis TVAG_322370 N 0.000
TVAG_323080 Trichomonas vaginalis TVAG_323080 N 0.000
TVAG_328710 Trichomonas vaginalis TVAG_328710 N 0.000
TVAG_336190 Trichomonas vaginalis TVAG_336190 N 0.000
TVAG_341450 Trichomonas vaginalis TVAG_341450 N 0.000
TVAG_354160 Trichomonas vaginalis TVAG_354160 N 0.000
TVAG_357730 Trichomonas vaginalis TVAG_357730 N 0.000
TVAG_365310 Trichomonas vaginalis TVAG_365310 N 0.000
TVAG_366540 Trichomonas vaginalis TVAG_366540 N 0.000
TVAG_370110 Trichomonas vaginalis TVAG_370110 N 0.000
TVAG_370740 Trichomonas vaginalis TVAG_370740 N 0.000
TVAG_372400 Trichomonas vaginalis TVAG_372400 N 0.000
TVAG_373520 Trichomonas vaginalis TVAG_373520 N 0.000
TVAG_374610 Trichomonas vaginalis TVAG_374610 N 0.000
TVAG_378230 Trichomonas vaginalis TVAG_378230 N 0.000
TVAG_392870 Trichomonas vaginalis TVAG_392870 N 0.000
TVAG_395590 Trichomonas vaginalis TVAG_395590 N 0.000
TVAG_395910 Trichomonas vaginalis TVAG_395910 N 0.000
TVAG_397540 Trichomonas vaginalis TVAG_397540 N 0.000
TVAG_400670 Trichomonas vaginalis TVAG_400670 N 0.000
TVAG_401500 Trichomonas vaginalis TVAG_401500 N 0.000
TVAG_408590 Trichomonas vaginalis TVAG_408590 N 0.000
TVAG_410580 Trichomonas vaginalis TVAG_410580 N 0.000
TVAG_413540 Trichomonas vaginalis TVAG_413540 N 0.000
TVAG_415170 Trichomonas vaginalis TVAG_415170 N 0.000
TVAG_419070 Trichomonas vaginalis TVAG_419070 N 0.000
TVAG_419450 Trichomonas vaginalis TVAG_419450 N 0.000
TVAG_420550 Trichomonas vaginalis TVAG_420550 N 0.000
TVAG_424900 Trichomonas vaginalis TVAG_424900 N 0.000
TVAG_427750 Trichomonas vaginalis TVAG_427750 N 0.000
TVAG_428470 Trichomonas vaginalis TVAG_428470 N 0.000
TVAG_435140 Trichomonas vaginalis TVAG_435140 N 0.000
TVAG_438640 Trichomonas vaginalis TVAG_438640 N 0.000
TVAG_438980 Trichomonas vaginalis TVAG_438980 N 0.000
TVAG_441020 Trichomonas vaginalis TVAG_441020 N 0.000
TVAG_441880 Trichomonas vaginalis TVAG_441880 N 0.000
TVAG_442440 Trichomonas vaginalis TVAG_442440 N 0.000
TVAG_443820 Trichomonas vaginalis TVAG_443820 N 0.000
TVAG_449990 Trichomonas vaginalis TVAG_449990 N 0.000
TVAG_457960 Trichomonas vaginalis TVAG_457960 N 0.000
TVAG_465690 Trichomonas vaginalis TVAG_465690 N 0.000
TVAG_477840 Trichomonas vaginalis TVAG_477840 N 0.000
TVAG_481800 Trichomonas vaginalis TVAG_481800 N 0.000
TVAG_484870 Trichomonas vaginalis TVAG_484870 N 0.000
TVAG_486490 Trichomonas vaginalis TVAG_486490 N 0.000
TVAG_488260 Trichomonas vaginalis TVAG_488260 N 0.000
TVAG_488720 Trichomonas vaginalis TVAG_488720 N 0.000
TVAG_489030 Trichomonas vaginalis TVAG_489030 N 0.000
TVAG_493340 Trichomonas vaginalis TVAG_493340 N 0.000
TVAG_496890 Trichomonas vaginalis TVAG_496890 N 0.000
TVAG_496900 Trichomonas vaginalis TVAG_496900 N 0.000
TVAG_497700 Trichomonas vaginalis TVAG_497700 N 0.000
TVAG_500580 Trichomonas vaginalis TVAG_500580 N 0.000
TVAG_502960 Trichomonas vaginalis TVAG_502960 N 0.000
TVAG_503090 Trichomonas vaginalis TVAG_503090 N 0.000
TVAG_511510 Trichomonas vaginalis TVAG_511510 N 0.000
TVAG_513290 Trichomonas vaginalis TVAG_513290 N 0.000
TVAG_514890 Trichomonas vaginalis TVAG_514890 N 0.000
TVAG_516680 Trichomonas vaginalis TVAG_516680 N 0.000
TVAG_516790 Trichomonas vaginalis TVAG_516790 N 0.000
TVAG_516860 Trichomonas vaginalis TVAG_516860 N 0.000
TVAG_518840 Trichomonas vaginalis TVAG_518840 N 0.000
TVAG_530100 Trichomonas vaginalis TVAG_530100 N 0.000
TVAG_532480 Trichomonas vaginalis TVAG_532480 N 0.000
TVAG_535670 Trichomonas vaginalis TVAG_535670 N 0.000
TVAG_542020 Trichomonas vaginalis TVAG_542020 N 0.000
TVAG_548520 Trichomonas vaginalis TVAG_548520 N 0.000
TVAG_551460 Trichomonas vaginalis TVAG_551460 N 0.000
TVAG_552010 Trichomonas vaginalis TVAG_552010 N 0.000
TVAG_555360 Trichomonas vaginalis TVAG_555360 N 0.000
TVAG_555720 Trichomonas vaginalis TVAG_555720 N 0.000
TVAG_557630 Trichomonas vaginalis TVAG_557630 N 0.000
TVAG_564540 Trichomonas vaginalis TVAG_564540 N 0.000
TVAG_564720 Trichomonas vaginalis TVAG_564720 N 0.000
TVAG_565070 Trichomonas vaginalis TVAG_565070 N 0.000
TVAG_565180 Trichomonas vaginalis TVAG_565180 N 0.000
TVAG_567350 Trichomonas vaginalis TVAG_567350 N 0.000
TVAG_567610 Trichomonas vaginalis TVAG_567610 N 0.000
TVAG_569770 Trichomonas vaginalis TVAG_569770 N 0.000
TVAG_569930 Trichomonas vaginalis TVAG_569930 N 0.000
TVAG_573210 Trichomonas vaginalis TVAG_573210 N 0.000
TVAG_579330 Trichomonas vaginalis TVAG_579330 N 0.000
TVAG_583180 Trichomonas vaginalis TVAG_583180 N 0.000
TVAG_591060 Trichomonas vaginalis TVAG_591060 N 0.000
TVAG_591850 Trichomonas vaginalis TVAG_591850 N 0.000
TVAG_593000 Trichomonas vaginalis TVAG_593000 N 0.000
TVAG_594390 Trichomonas vaginalis TVAG_594390 N 0.000
TVAG_595810 Trichomonas vaginalis TVAG_595810 N 0.000
TVAG_596090 Trichomonas vaginalis TVAG_596090 N 0.000
TVAG_598650 Trichomonas vaginalis TVAG_598650 N 0.000
TVAG_607240 Trichomonas vaginalis TVAG_607240 N 0.000