CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0008s11900
(
Populus trichocarpa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
POPTR_0008s11900
T004679_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF118
M01047_2.00
Arabidopsis thaliana
NCGCCGYNN
NNRCGGCGN
PBM
Sullivan et al.(2014)
pTH7330
0.712
0.796
ERF118
M06591_2.00
Arabidopsis thaliana
YHDYCKCCGCCGYHD
HDRCGGCGGMGRHDR
Dap-seq
OMalley et al.(2016)
CRF10_col100_a
0.712
0.796
ERF118
M06592_2.00
Arabidopsis thaliana
NGDATCHNDGATTCNNH
DNNGAATCHNDGATHCN
Dap-seq
OMalley et al.(2016)
CRF10_colamp_a
0.712
0.796
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0008s11900.1
AP2
88
139
KKPVGVRQRKWGKWAAEIRNPVTKVRTWLGTFNTLEEAAQAYEAKKQEYEAL
Links
Other
AP2
family TFs
Other
Populus trichocarpa
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL002079
Aedes aegypti
AAEL002079
N
0.000
AALB002019
Anopheles albimanus
AALB002019
N
0.000
AARA005043
Anopheles arabiensis
AARA005043
N
0.000
ACHR001889
Anopheles christyi
ACHR001889
N
0.000
ACOM030546
Anopheles coluzzii
ACOM030546
N
0.000
ACUA002940
Anopheles culicifacies
ACUA002940
N
0.000
ADAC008437
Anopheles darlingi
ADAC008437
N
0.000
ADIR011245
Anopheles dirus
ADIR011245
N
0.000
AEPI008198
Anopheles epiroticus
AEPI008198
N
0.000
AFAF002703
Anopheles farauti
AFAF002703
N
0.000
AFUN015813
Anopheles funestus
AFUN015813
N
0.000
AGAP008084
Anopheles gambiae
AGAP008084
N
0.000
AMAM002157
Anopheles maculatus
AMAM002157
N
0.000
AMEC008629
Anopheles melas
AMEC008629
N
0.000
AMEM005132
Anopheles merus
AMEM005132
N
0.000
AMIN006189
Anopheles minimus
AMIN006189
N
0.000
AQUA001070
Anopheles quadriannulatus
AQUA001070
N
0.000
ASIS015471
Anopheles sinensis
ASIS015471
N
0.000
ASTEI01836
Anopheles stephensi
ASTEI01836
N
0.000
CPIJ001883
Culex quinquefasciatus
CPIJ001883
N
0.000
CpipJ_CPIJ001883
Culex pipiens
CpipJ_CPIJ001883
N
0.000
GA20441
Drosophila pseudoobscura
FBgn0080436
N
0.000
GB54865
Apis mellifera
GB54865
N
0.000
GD23502
Drosophila simulans
FBgn0194881
N
0.000
GE18732
Drosophila yakuba
FBgn0236124
N
0.000
GF14757
Drosophila ananassae
FBgn0091784
N
0.000
GG10512
Drosophila erecta
FBgn0102820
N
0.000
GH11614
Drosophila grimshawi
FBgn0119094
N
0.000
GI17918
Drosophila mojavensis
FBgn0140659
N
0.000
GJ17690
Drosophila virilis
FBgn0204859
N
0.000
GK15318
Drosophila willistoni
FBgn0217323
N
0.000
GL24756
Drosophila persimilis
FBgn0162344
N
0.000
GM16720
Drosophila sechellia
FBgn0171633
N
0.000
LCUP011585
Lucilia cuprina
LCUP011585
N
0.000
MDOA011496
Musca domestica
MDOA011496
N
0.000
NV15957
Nasonia vitripennis
NV15957
N
0.000
PPAI007775
Phlebotomus papatasi
PPAI007775
N
0.000
SINV12226
Solenopsis invicta
SINV12226
N
0.000
Trf
Drosophila melanogaster
FBgn0010287
N
0.000