POPTR_0010s22320 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0010s22320 T004699_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.682 0.882
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.680 0.871
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s22320.1 AP2 167 216
POPTR_0010s22320.1 AP2 259 295

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28752.m000339 Ricinus communis 28752.m000339 I 0.684
29805.m001494 Ricinus communis 29805.m001494 I 0.683
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.684
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.689
AP2 Arabidopsis thaliana AT4G36920 I 0.680
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.680
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.692
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.689
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.684
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.690
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.684
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.693
Bo1g004960 Brassica oleracea Bo1g004960 I 0.680
Bo4g070350 Brassica oleracea Bo4g070350 I 0.680
Bo7g064000 Brassica oleracea Bo7g064000 I 0.680
Bo7g118400 Brassica oleracea Bo7g118400 I 0.680
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.680
Bra011741 Brassica rapa Bra011741 I 0.680
Bra011939 Brassica rapa Bra011939 I 0.680
Bra012139 Brassica rapa Bra012139 I 0.680
Bra017809 Brassica rapa Bra017809 I 0.680
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.691
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.684
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.682
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.680
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.680
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.682
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.684
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.684
Ca_02499 Cicer arietinum Ca_02499 I 0.684
Ca_09295 Cicer arietinum Ca_09295 I 0.680
Ca_12010 Cicer arietinum Ca_12010 I 0.679
Ca_14618 Cicer arietinum Ca_14618 I 0.680
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.678
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.684
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.684
Cla000716 Citrullus lanatus Cla000716 I 0.681
Cla018124 Citrullus lanatus Cla018124 I 0.685
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.681
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.685
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.683
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.684
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.681
F775_32962 Aegilops tauschii F775_32962 I 0.684
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.684
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.681
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.685
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.681
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.684
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.684
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.684
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.681
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.685
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.681
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.684
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.678
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.678
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.689
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.679
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.695
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.685
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.680
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.681
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.681
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.686
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.683
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.693
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.688
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.678
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.685
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.690
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.679
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.680
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.687
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.684
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.678
MDP0000181606 Malus domestica MDP0000181606 I 0.679
MDP0000200319 Malus domestica MDP0000200319 I 0.685
mgf009315m Mimulus guttatus mgf009315m I 0.680
mgf021945m Mimulus guttatus mgf021945m I 0.680
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.692
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.687
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.683
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.680
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.681
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.679
OB03G45870 Oryza brachyantha OB03G45870 I 0.682
OBART07G08110 Oryza barthii OBART07G08110 I 0.693
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.690
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.693
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.693
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.684
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.690
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.693
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.693
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.690
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.690
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.684
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.693
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.684
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.684
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.693
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.690
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.693
OS05G0121600 Oryza sativa OS05G0121600 I 0.684
OS07G0235800 Oryza sativa OS07G0235800 I 0.693
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.689
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.684
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.684
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.695
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.695
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.684
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.681
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.679
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.679
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.684
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.677
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.685
PK02403.1 Cannabis sativa PK02403.1 I 0.681
PK07183.1 Cannabis sativa PK07183.1 I 0.683
Pm000974 Prunus mume Pm000974 I 0.679
Pm002492 Prunus mume Pm002492 I 0.685
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.678
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.681
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.681
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.685
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.685
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.680
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.682
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.684
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.681
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.685
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.681
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.686
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.695
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.689
Si025305m.g Setaria italica Si025305m.g I 0.684
Si029636m.g Setaria italica Si029636m.g I 0.689
Si036068m.g Setaria italica Si036068m.g I 0.695
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.678
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.681
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.680
Solyc09g007260.2 Solanum lycopersicum Solyc09g007260.2 N 0.681
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.685
TCM_000665 Theobroma cacao TCM_000665 I 0.678
TCM_022077 Theobroma cacao TCM_022077 I 0.685
TCM_042000 Theobroma cacao TCM_042000 I 0.684
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.680
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.682
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.681
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.684
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.684
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.684
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.685
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.691