CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
XM_002324763.1
(
Populus trichocarpa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
POPTR_0018s00270
T004744_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0018s00270.1
AP2
1
45
MRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGN
Links
Other
AP2
family TFs
Other
Populus trichocarpa
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.C00590
Eucalyptus grandis
Eucgr.C00590
N
0.757
fgenesh2_kg.4__494__AT2G25820.1
Arabidopsis lyrata
fgenesh2_kg.4__494__AT2G25820.1
N
0.719
GSMUA_Achr4G24580_001
Musa acuminata
GSMUA_Achr4G24580_001
N
0.698
GSMUA_Achr4G26980_001
Musa acuminata
GSMUA_Achr4G26980_001
N
0.704
GSMUA_Achr5G06570_001
Musa acuminata
GSMUA_Achr5G06570_001
N
0.754
GSMUA_Achr5G13500_001
Musa acuminata
GSMUA_Achr5G13500_001
N
0.749
GSMUA_Achr5G15330_001
Musa acuminata
GSMUA_Achr5G15330_001
N
0.749
GSMUA_Achr7G06970_001
Musa acuminata
GSMUA_Achr7G06970_001
N
0.682
GSMUA_AchrUn_randomG27090_001
Musa acuminata
GSMUA_AchrUn_randomG27090_001
N
0.704
POPTR_0006s25500
Populus trichocarpa
POPTR_0006s25500
I
0.687