Sb02g030340 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb02g030340 T004972_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1A
M09710_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_01 		0.841 0.887
DREB1A
M09711_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SED_Q2 		0.841 0.887
Q8GZQ2_MAIZE
M09720_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1A_02 		0.748 0.811
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g030340.1 AP2 59 112

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30024.m001746 Ricinus communis 30024.m001746 N
30131.m007244 Ricinus communis 30131.m007244 N
Bo3g179450 Brassica oleracea Bo3g179450 N
Bo5g078760 Brassica oleracea Bo5g078760 N
Bo6g022200 Brassica oleracea Bo6g022200 N
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N
Bra014251 Brassica rapa Bra014251 N
Bra018848 Brassica rapa Bra018848 N
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N
Carubv10008999m.g Capsella rubella Carubv10008999m.g N
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N
cassava20989.m1 Manihot esculenta cassava20989.m1 N
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N
Ca_11133 Cicer arietinum Ca_11133 N
Ca_27441 Cicer arietinum Ca_27441 N
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N
Cucsa.055340 Cucumis sativus Cucsa.055340 N
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N
GLYMA01G43620 Glycine max GLYMA01G43620 N
GLYMA11G01850 Glycine max GLYMA11G01850 N
GLYMA11G10170 Glycine max GLYMA11G10170 N
GLYMA12G02490 Glycine max GLYMA12G02490 N
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N
Lus10009717.g Linum usitatissimum Lus10009717.g N
Lus10022418.g Linum usitatissimum Lus10022418.g N
mgf008315m Mimulus guttatus mgf008315m N
mgf022906m Mimulus guttatus mgf022906m N
MTR_4g076140 Medicago truncatula MTR_4g076140 N
MTR_5g009080 Medicago truncatula MTR_5g009080 N
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N
PK02707.1 Cannabis sativa PK02707.1 N
Pm012190 Prunus mume Pm012190 N
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N
SCL3 Populus trichocarpa POPTR_0009s05330 N
SCL3 Vitis vinifera VIT_06s0009g02390 N
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N
SCL3 Arabidopsis thaliana AT1G50420 N
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N
TCM_040833 Theobroma cacao TCM_040833 N
TCM_042392 Theobroma cacao TCM_042392 N
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N