CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb07g004580
(
Sorghum bicolor
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Sb07g004580
T005032_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb07g004580.1
AP2
119
179
SKFHGVTRLKWSGKYEAHLWDNTSQVKGRKRKGKHVYLGSYVNEEQAAKAHDLAALKYWGT
Sb07g004580.1
AP2
223
276
SSYRGVTRRKDGKWQARIGRIGESRDTKDIYLGTFETEEEAAEAYDLAAIELRG
Sb07g004580.2
AP2
119
179
SKFHGVTRLKWSGKYEAHLWDNTSQVKGRKRKGKHVYLGSYVNEEQAAKAHDLAALKYWGT
Links
Other
AP2
family TFs
Other
Sorghum bicolor
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAY96799
Xenopus tropicalis
AAY96799
I
AAZ04408
Xenopus tropicalis
AAZ04408
I
Alligator_sinensis_CCG015374.1
Alligator sinensis
Alligator_sinensis_CCG015374.1
I
ENSAMEG00000015855
Ailuropoda melanoleuca
ENSAMEG00000015855
I
ENSAMXG00000012278
Astyanax mexicanus
ENSAMXG00000012278
I
ENSAMXG00000012796
Astyanax mexicanus
ENSAMXG00000012796
I
ENSAPLG00000008077
Anas platyrhynchos
ENSAPLG00000008077
I
ENSBTAP00000000742-D1
Bos grunniens
ENSBTAP00000000742-D1
I
ENSBTAP00000028261-D1
Bos grunniens
ENSBTAP00000028261-D1
I
ENSCPOG00000021042
Cavia porcellus
ENSCPOG00000021042
I
ENSCSAG00000000668
Chlorocebus sabaeus
ENSCSAG00000000668
I
ENSCSAG00000008869
Chlorocebus sabaeus
ENSCSAG00000008869
I
ENSDORG00000014783
Dipodomys ordii
ENSDORG00000014783
I
ENSFALG00000007228
Ficedula albicollis
ENSFALG00000007228
I
ENSGACG00000015969
Gasterosteus aculeatus
ENSGACG00000015969
I
ENSGMOG00000000092
Gadus morhua
ENSGMOG00000000092
I
ENSGMOG00000015708
Gadus morhua
ENSGMOG00000015708
I
ENSGMOG00000018048
Gadus morhua
ENSGMOG00000018048
I
ENSLACG00000009729
Latimeria chalumnae
ENSLACG00000009729
I
ENSLACG00000017918
Latimeria chalumnae
ENSLACG00000017918
I
ENSLOCG00000004988
Lepisosteus oculatus
ENSLOCG00000004988
I
ENSLOCG00000007298
Lepisosteus oculatus
ENSLOCG00000007298
I
ENSMEUG00000013941
Macropus eugenii
ENSMEUG00000013941
I
ENSMICG00000012430
Microcebus murinus
ENSMICG00000012430
I
ENSMODG00000019833
Monodelphis domestica
ENSMODG00000019833
I
ENSMPUG00000003643
Mustela putorius furo
ENSMPUG00000003643
I
ENSMPUG00000006870
Mustela putorius furo
ENSMPUG00000006870
I
ENSMPUG00000013915
Mustela putorius furo
ENSMPUG00000013915
I
ENSNLEG00000006836
Nomascus leucogenys
ENSNLEG00000006836
I
ENSOARG00000007304
Ovis aries
ENSOARG00000007304
I
ENSOARG00000020422
Ovis aries
ENSOARG00000020422
I
ENSONIG00000002398
Oreochromis niloticus
ENSONIG00000002398
I
ENSONIG00000002619
Oreochromis niloticus
ENSONIG00000002619
I
ENSONIG00000010641
Oreochromis niloticus
ENSONIG00000010641
I
ENSORLG00000004584
Oryzias latipes
ENSORLG00000004584
I
ENSP00000232424
Macaca fascicularis
ENSP00000232424
I
ENSPANG00000018250
Papio anubis
ENSPANG00000018250
I
ENSPANG00000024455
Papio anubis
ENSPANG00000024455
I
ENSPFOG00000016659
Poecilia formosa
ENSPFOG00000016659
I
ENSPFOG00000019084
Poecilia formosa
ENSPFOG00000019084
I
ENSPFOG00000022586
Poecilia formosa
ENSPFOG00000022586
I
ENSPPYG00000014419
Pongo abelii
ENSPPYG00000014419
I
ENSPSIG00000013040
Pelodiscus sinensis
ENSPSIG00000013040
I
ENSPTRG00000023647
Pan troglodytes
ENSPTRG00000023647
I
ENSPTRG00000039445
Pan troglodytes
ENSPTRG00000039445
I
ENSSSCG00000024430
Sus scrofa
ENSSSCG00000024430
I
ENSSSCG00000026362
Sus scrofa
ENSSSCG00000026362
I
ENSSTOG00000026531
Ictidomys tridecemlineatus
ENSSTOG00000026531
I
ENSTNIG00000007837
Tetraodon nigroviridis
ENSTNIG00000007837
I
ENSTRUG00000001493
Takifugu rubripes
ENSTRUG00000001493
I
ENSXMAG00000003794
Xiphophorus maculatus
ENSXMAG00000003794
I
ENSXMAG00000004442
Xiphophorus maculatus
ENSXMAG00000004442
I
estExt_fgenesh2_kg.C_140002
Branchiostoma floridae
estExt_fgenesh2_kg.C_140002
I
estExt_fgenesh2_kg.C_9080002
Branchiostoma floridae
estExt_fgenesh2_kg.C_9080002
I
estExt_fgenesh2_pg.C_2610041
Branchiostoma floridae
estExt_fgenesh2_pg.C_2610041
I
estExt_fgenesh2_pg.C_2610044
Branchiostoma floridae
estExt_fgenesh2_pg.C_2610044
I
estExt_fgenesh2_pg.C_3520029
Branchiostoma floridae
estExt_fgenesh2_pg.C_3520029
I
estExt_fgenesh2_pg.C_3520032
Branchiostoma floridae
estExt_fgenesh2_pg.C_3520032
I
estExt_fgenesh2_pg.C_3670032
Branchiostoma floridae
estExt_fgenesh2_pg.C_3670032
I
estExt_GenewiseH_1.C_2610051
Branchiostoma floridae
estExt_GenewiseH_1.C_2610051
I
estExt_GenewiseH_1.C_960240
Branchiostoma floridae
estExt_GenewiseH_1.C_960240
I
hairy1
Gallus gallus
ENSGALG00000002055
I
her6
Danio rerio
ENSDARG00000006514
I
her6
Gasterosteus aculeatus
ENSGACG00000009264
I
her6
Tetraodon nigroviridis
ENSTNIG00000015567
I
her6
Takifugu rubripes
ENSTRUG00000017395
I
her9
Danio rerio
ENSDARG00000056438
I
her9
Gasterosteus aculeatus
ENSGACG00000007334
I
her9
Tetraodon nigroviridis
ENSTNIG00000015161
I
her9
Takifugu rubripes
ENSTRUG00000009985
I
HES1
Anolis carolinensis
ENSACAG00000001611
I
HES1
Bos taurus
ENSBTAG00000000569
I
HES1
Choloepus hoffmanni
ENSCHOG00000005633
I
HES1
Callithrix jacchus
ENSCJAG00000014044
I
HES1
Dasypus novemcinctus
ENSDNOG00000039639
I
HES1
Equus caballus
ENSECAG00000026945
I
HES1
Homo sapiens
ENSG00000114315
D
HES1
Gorilla gorilla
ENSGGOG00000008521
I
HES1
Loxodonta africana
ENSLAFG00000008932
I
HES1
Meleagris gallopavo
ENSMGAG00000007566
I
HES1
Myotis lucifugus
ENSMLUG00000008549
I
Hes1
Mus musculus
ENSMUSG00000022528
D
HES1
Ornithorhynchus anatinus
ENSOANG00000015683
I
HES1
Otolemur garnettii
ENSOGAG00000032425
I
hes1
Oryzias latipes
ENSORLG00000007556
I
HES1
Pan troglodytes
ENSPTRG00000015753
I
HES1
Pteropus vampyrus
ENSPVAG00000015487
I
Hes1
Rattus norvegicus
ENSRNOG00000001720
I
HES1
Tursiops truncatus
ENSTTRG00000001687
I
hes1
Xenopus tropicalis
XB-GENE-487995
I
hes1.L
Xenopus laevis
XB-GENE-865756
I
hes1.S
Xenopus laevis
XB-GENE-6256448
I
HES2
Procavia capensis
ENSPCAG00000007135
I
HES4
Bos taurus
ENSBTAG00000014705
I
HES4
Canis familiaris
ENSCAFG00000019350
I
HES4
Dasypus novemcinctus
ENSDNOG00000024495
I
HES4
Homo sapiens
ENSG00000188290
I
HES4
Gorilla gorilla
ENSGGOG00000013399
I
HES4
Microcebus murinus
ENSMICG00000015660
I
HES4
Macaca mulatta
ENSMMUG00000001817
I
HES4
Monodelphis domestica
ENSMODG00000018647
I
hes4
Oryzias latipes
ENSORLG00000005453
I
HES4
Pteropus vampyrus
ENSPVAG00000010837
I
HES4
Taeniopygia guttata
ENSTGUG00000009134
I
hes4
Xenopus tropicalis
XB-GENE-487830
I
hes4.L
Xenopus laevis
XB-GENE-865740
I
hes4.S
Xenopus laevis
XB-GENE-6256031
I
Myotis_brandtii_Hes1_10032756
Myotis brandtii
Myotis_brandtii_Hes1_10032756
I
Ogr04559
Ophisaurus gracilis
Ogr04559
I
Ogr11517
Ophisaurus gracilis
Ogr11517
I
Pvit_06331
Pogona vitticeps
Pvit_06331
I
Pvit_14102
Pogona vitticeps
Pvit_14102
I