TCM_027348 (Theobroma cacao)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 TCM_027348 T005633_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.683 0.725
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.683 0.725
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.683 0.725
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.683 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY25976 AP2 183 234

Links

Other AP2 family TFs
Other Theobroma cacao TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27446.m000475 Ricinus communis 27446.m000475 I 0.851
27904.m000217 Ricinus communis 27904.m000217 I 0.680
29983.m003147 Ricinus communis 29983.m003147 I 0.678
30190.m011321 Ricinus communis 30190.m011321 I 0.680
AMTR_s00026p00180130 Amborella trichopoda AMTR_s00026p00180130 I 0.861
Aquca_036_00070 Aquilegia coerulea Aquca_036_00070 I 0.680
BGIOSGA004611 Oryza indica BGIOSGA004611 I 0.679
BGIOSGA017796 Oryza indica BGIOSGA017796 I 0.678
BGIOSGA019608 Oryza indica BGIOSGA019608 N 0.715
Bo2g095830 Brassica oleracea Bo2g095830 N 0.779
Bo2g122260 Brassica oleracea Bo2g122260 I 0.683
Bostr.19424s0625 Boechera stricta Bostr.19424s0625 I 0.680
Bostr.20129s0456 Boechera stricta Bostr.20129s0456 N 0.831
Bostr.3148s0037 Boechera stricta Bostr.3148s0037 I 0.683
Bra006325 Brassica rapa Bra006325 I 0.682
Bra008460 Brassica rapa Bra008460 N 0.820
Bra015266 Brassica rapa Bra015266 I 0.690
Bra036016 Brassica rapa Bra036016 I 0.683
BRADI2G52370 Brachypodium distachyon BRADI2G52370 I 0.679
BRADI3G18070 Brachypodium distachyon BRADI3G18070 I 0.710
Cagra.0381s0006 Capsella grandiflora Cagra.0381s0006 I 0.681
Cagra.0897s0005 Capsella grandiflora Cagra.0897s0005 I 0.679
Cagra.1725s0082 Capsella grandiflora Cagra.1725s0082 N 0.831
Carubv10011371m.g Capsella rubella Carubv10011371m.g I 0.679
Carubv10014552m.g Capsella rubella Carubv10014552m.g I 0.681
Carubv10022119m.g Capsella rubella Carubv10022119m.g N 0.831
Carubv10027246m.g Capsella rubella Carubv10027246m.g I 0.681
cassava1589.valid.m1 Manihot esculenta cassava1589.valid.m1 I 0.680
cassava20937.m1 Manihot esculenta cassava20937.m1 I 0.680
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.683
cassava38416.m1 Manihot esculenta cassava38416.m1 I 0.851
cassava46560.m1 Manihot esculenta cassava46560.m1 I 0.681
Ca_00327 Cicer arietinum Ca_00327 I 0.678
Ca_11261 Cicer arietinum Ca_11261 I 0.680
Ca_20041 Cicer arietinum Ca_20041 I 0.855
Ca_20544 Cicer arietinum Ca_20544 I 0.693
Ca_22534 Cicer arietinum Ca_22534 I 0.684
chr6.CM0114.120.nc Lotus japonicus chr6.CM0114.120.nc I 0.678
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.680
Ciclev10016276m.g Citrus clementina Ciclev10016276m.g I 0.683
Ciclev10016463m.g Citrus clementina Ciclev10016463m.g I 0.680
Ciclev10027171m.g Citrus clementina Ciclev10027171m.g I 0.855
Cla002268 Citrullus lanatus Cla002268 I 0.683
Cla015583 Citrullus lanatus Cla015583 I 0.863
Cla020000 Citrullus lanatus Cla020000 I 0.683
Cucsa.046390 Cucumis sativus Cucsa.046390 I 0.680
Cucsa.105790 Cucumis sativus Cucsa.105790 I 0.863
Cucsa.126880 Cucumis sativus Cucsa.126880 I 0.685
Cucsa.195660 Cucumis sativus Cucsa.195660 I 0.683
ERF084 Arabidopsis thaliana AT1G80580 N 0.831
ERF9 Arabidopsis thaliana AT5G44210 D 0.683
ERF9 Arabidopsis lyrata fgenesh2_kg.8__388__AT5G44210.1 I 0.683
Eucgr.F01164 Eucalyptus grandis Eucgr.F01164 I 0.681
Eucgr.F03941 Eucalyptus grandis Eucgr.F03941 N 0.840
evm.TU.supercontig_10.125 Carica papaya evm.TU.supercontig_10.125 I 0.865
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.680
evm.TU.supercontig_27.16 Carica papaya evm.TU.supercontig_27.16 I 0.680
evm.TU.supercontig_83.80 Carica papaya evm.TU.supercontig_83.80 I 0.678
e_gw1.14.213.1 Physcomitrella patens e_gw1.14.213.1 N 0.773
e_gw1.145.79.1 Physcomitrella patens e_gw1.145.79.1 N 0.780
e_gw1.15.234.1 Physcomitrella patens e_gw1.15.234.1 N 0.785
e_gw1.276.69.1 Physcomitrella patens e_gw1.276.69.1 N 0.769
fgenesh1_pg.scaffold_23000002 Physcomitrella patens fgenesh1_pg.scaffold_23000002 I 0.799
fgenesh1_pm.C_scaffold_2001935 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2001935 N 0.831
gene15953-v1.0-hybrid Fragaria vesca gene15953-v1.0-hybrid I 0.857
gene29738-v1.0-hybrid Fragaria vesca gene29738-v1.0-hybrid I 0.680
GLYMA06G35710 Glycine max GLYMA06G35710 I 0.680
GLYMA07G03041 Glycine max GLYMA07G03041 I 0.855
GLYMA08G23074 Glycine max GLYMA08G23074 I 0.861
GLYMA08G43300 Glycine max GLYMA08G43300 I 0.691
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.680
GLYMA12G35550 Glycine max GLYMA12G35550 I 0.680
GLYMA13G30990 Glycine max GLYMA13G30990 I 0.678
GLYMA13G34920 Glycine max GLYMA13G34920 I 0.680
GLYMA15G08370 Glycine max GLYMA15G08370 I 0.678
GLYMA18G10290 Glycine max GLYMA18G10290 I 0.691
Gorai.002G067600 Gossypium raimondii Gorai.002G067600 I 0.682
Gorai.005G200200 Gossypium raimondii Gorai.005G200200 I 0.678
Gorai.006G088000 Gossypium raimondii Gorai.006G088000 I 0.680
Gorai.006G107500 Gossypium raimondii Gorai.006G107500 I 0.865
Gorai.009G125700 Gossypium raimondii Gorai.009G125700 N 0.845
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.680
Gorai.010G155900 Gossypium raimondii Gorai.010G155900 I 0.680
Gorai.010G256600 Gossypium raimondii Gorai.010G256600 I 0.678
GRMZM2G310368 Zea mays GRMZM2G310368 I 0.681
GSMUA_Achr1G25890_001 Musa acuminata GSMUA_Achr1G25890_001 I 0.727
GSMUA_Achr4G23620_001 Musa acuminata GSMUA_Achr4G23620_001 I 0.684
GSMUA_Achr4G33270_001 Musa acuminata GSMUA_Achr4G33270_001 I 0.686
GSMUA_Achr6G00250_001 Musa acuminata GSMUA_Achr6G00250_001 I 0.686
GSMUA_Achr7G00350_001 Musa acuminata GSMUA_Achr7G00350_001 I 0.684
GSMUA_Achr7G03640_001 Musa acuminata GSMUA_Achr7G03640_001 I 0.685
GSMUA_Achr8G03550_001 Musa acuminata GSMUA_Achr8G03550_001 I 0.679
GSMUA_Achr8G33590_001 Musa acuminata GSMUA_Achr8G33590_001 I 0.682
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.678
GSMUA_AchrUn_randomG16100_001 Musa acuminata GSMUA_AchrUn_randomG16100_001 I 0.688
gw1.204.54.1 Physcomitrella patens gw1.204.54.1 N 0.808
gw1.340.39.1 Physcomitrella patens gw1.340.39.1 N 0.751
LPERR01G29260 Leersia perrieri LPERR01G29260 I 0.679
LPERR03G32900 Leersia perrieri LPERR03G32900 I 0.680
LPERR05G17480 Leersia perrieri LPERR05G17480 I 0.678
Lus10014345.g Linum usitatissimum Lus10014345.g N 0.803
Lus10015415.g Linum usitatissimum Lus10015415.g I 0.680
Lus10026053.g Linum usitatissimum Lus10026053.g N 0.796
MDP0000264187 Malus domestica MDP0000264187 I 0.852
mgf019214m Mimulus guttatus mgf019214m I 0.678
mgf023662m Mimulus guttatus mgf023662m I 0.865
MLOC_24530 Hordeum vulgare MLOC_24530 I 0.679
MTR_2g014340 Medicago truncatula MTR_2g014340 I 0.687
MTR_2g078680 Medicago truncatula MTR_2g078680 I 0.681
MTR_4g009260 Medicago truncatula MTR_4g009260 I 0.855
MTR_4g078710 Medicago truncatula MTR_4g078710 I 0.680
OB01G42720 Oryza brachyantha OB01G42720 I 0.679
OBART01G33870 Oryza barthii OBART01G33870 I 0.679
OBART05G21580 Oryza barthii OBART05G21580 I 0.678
OGLUM01G38110 Oryza glumaepatula OGLUM01G38110 I 0.679
OGLUM05G22790 Oryza glumaepatula OGLUM05G22790 I 0.678
OLONG_021733 Oryza longistaminata OLONG_021733 I 0.679
OMERI01G30710 Oryza meridionalis OMERI01G30710 I 0.679
OMERI05G10040 Oryza meridionalis OMERI05G10040 N 0.715
OMERI05G19490 Oryza meridionalis OMERI05G19490 I 0.678
ONIVA01G38670 Oryza nivara ONIVA01G38670 I 0.679
ONIVA05G11840 Oryza nivara ONIVA05G11840 N 0.715
ONIVA05G22270 Oryza nivara ONIVA05G22270 I 0.678
OPUNC01G32930 Oryza punctata OPUNC01G32930 I 0.679
OPUNC05G19230 Oryza punctata OPUNC05G19230 I 0.678
orange1.1g026240m.g Citrus sinensis orange1.1g026240m.g I 0.680
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.680
orange1.1g047950m.g Citrus sinensis orange1.1g047950m.g I 0.855
ORGLA01G0278100 Oryza glaberrima ORGLA01G0278100 I 0.679
ORGLA05G0187600 Oryza glaberrima ORGLA05G0187600 I 0.678
ORUFI01G37120 Oryza rufipogon ORUFI01G37120 I 0.679
ORUFI05G12300 Oryza rufipogon ORUFI05G12300 N 0.715
ORUFI05G22850 Oryza rufipogon ORUFI05G22850 I 0.678
OS01G0797600 Oryza sativa OS01G0797600 I 0.679
OS05G0316800 Oryza sativa OS05G0316800 N 0.715
OS05G0497300 Oryza sativa OS05G0497300 I 0.678
Pavir.Ea03147 Panicum virgatum Pavir.Ea03147 I 0.679
Pavir.Eb03458 Panicum virgatum Pavir.Eb03458 I 0.679
Pavir.Fa01730 Panicum virgatum Pavir.Fa01730 I 0.695
Pavir.Fb00952 Panicum virgatum Pavir.Fb00952 I 0.694
Pavir.Fb01486 Panicum virgatum Pavir.Fb01486 I 0.694
Pavir.J14354 Panicum virgatum Pavir.J14354 I 0.677
PGSC0003DMG400000091 Solanum tuberosum PGSC0003DMG400000091 I 0.703
PGSC0003DMG400010135 Solanum tuberosum PGSC0003DMG400010135 N 0.809
PGSC0003DMG400012828 Solanum tuberosum PGSC0003DMG400012828 I 0.697
PGSC0003DMG401013892 Solanum tuberosum PGSC0003DMG401013892 I 0.680
PGSC0003DMG402013892 Solanum tuberosum PGSC0003DMG402013892 I 0.680
PK02602.1 Cannabis sativa PK02602.1 I 0.680
PK19363.1 Cannabis sativa PK19363.1 D 0.683
Pm011391 Prunus mume Pm011391 I 0.678
Pm013734 Prunus mume Pm013734 I 0.852
POPTR_0001s32050 Populus trichocarpa POPTR_0001s32050 I 0.851
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.681
POPTR_0004s04720 Populus trichocarpa POPTR_0004s04720 I 0.683
POPTR_0011s05580 Populus trichocarpa POPTR_0011s05580 I 0.683
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.681
POPTR_0013s15440 Populus trichocarpa POPTR_0013s15440 I 0.729
POPTR_0017s08090 Populus trichocarpa POPTR_0017s08090 I 0.859
PRUPE_ppa010982mg Prunus persica PRUPE_ppa010982mg I 0.678
PRUPE_ppa020928mg Prunus persica PRUPE_ppa020928mg I 0.859
Q84LQ6_SOLLC Solanum lycopersicum Q84LQ6_SOLLC I 0.680
Q84XB1_SOLLC Solanum lycopersicum Q84XB1_SOLLC I 0.680
SapurV1A.0012s0580 Salix purpurea SapurV1A.0012s0580 I 0.683
SapurV1A.0058s0710 Salix purpurea SapurV1A.0058s0710 I 0.851
SapurV1A.1000s0130 Salix purpurea SapurV1A.1000s0130 I 0.859
SapurV1A.1244s0010 Salix purpurea SapurV1A.1244s0010 I 0.681
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.681
SapurV1A.2062s0030 Salix purpurea SapurV1A.2062s0030 I 0.692
SELMODRAFT_412693 Selaginella moellendorffii SELMODRAFT_412693 N 0.810
SELMODRAFT_417258 Selaginella moellendorffii SELMODRAFT_417258 N 0.810
SELMODRAFT_428344 Selaginella moellendorffii SELMODRAFT_428344 N 0.801
SELMODRAFT_428599 Selaginella moellendorffii SELMODRAFT_428599 N 0.801
Si002729m.g Setaria italica Si002729m.g I 0.679
Si008428m.g Setaria italica Si008428m.g I 0.691
Si023088m.g Setaria italica Si023088m.g I 0.677
Solyc01g095500.2 Solanum lycopersicum Solyc01g095500.2 I 0.709
Solyc03g117230.1 Solanum lycopersicum Solyc03g117230.1 N 0.845
Solyc10g009110.1 Solanum lycopersicum Solyc10g009110.1 I 0.680
Solyc12g005960.1 Solanum lycopersicum Solyc12g005960.1 I 0.680
TCM_029820 Theobroma cacao TCM_029820 I 0.680
TCM_031608 Theobroma cacao TCM_031608 I 0.680
Thhalv10000556m.g Eutrema salsugineum Thhalv10000556m.g N 0.827
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.683
Thhalv10019474m.g Eutrema salsugineum Thhalv10019474m.g N 0.827
Thhalv10021456m.g Eutrema salsugineum Thhalv10021456m.g I 0.681
TRAES3BF075600050CFD_g Triticum aestivum TRAES3BF075600050CFD_g I 0.679
VIT_09s0002g08830 Vitis vinifera VIT_09s0002g08830 I 0.865
VIT_10s0003g00140 Vitis vinifera VIT_10s0003g00140 I 0.683
VIT_12s0028g03270 Vitis vinifera VIT_12s0028g03270 I 0.678
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.680