cassava15702.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava15702.m1 T006810_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.824 0.920
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.824 0.920
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.808 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava15702.m1 AP2 233 284

Links

Other AP2 family TFs
Other Manihot esculenta TFs

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_060680 Aspergillus clavatus CADACLAG00006069 N
AFUA_3G04070 Aspergillus fumigatus CADAFUAG00000375 N
ANIA_09397 Aspergillus nidulans CADANIAG00001184 N
ARB_06056 Arthroderma benhamiae ARB_06056 N
ATEG_02862 Aspergillus terreus CADATEAG00010270 N
BDDG_07814 Blastomyces dermatitidis BDDG_07814 N
CADAFLAG00008613 Aspergillus flavus CADAFLAG00008613 N
CADANGAG00000016 Aspergillus niger CADANGAG00000016 N
CADAORAG00011876 Aspergillus oryzae CADAORAG00011876 N
CIMG_08455 Coccidioides immitis CIMG_08455 N
CPC735_061230 Coccidioides posadasii CPC735_061230 N
EURHEDRAFT_524848 Aspergillus ruber EURHEDRAFT_524848 N
fgenesh1_pm.00771_#_439 Aspergillus carbonarius fgenesh1_pm.00771_#_439 N
H102_02756 Trichophyton rubrum H102_02756 N
H105_02773 Trichophyton soudanense H105_02773 N
HCBG_08372 Histoplasma capsulatum HCBG_08372 N
MCYG_02773 Microsporum canis MCYG_02773 N
MCYG_02773 Arthroderma otae MCYG_02773 N
NFIA_006380 Neosartorya fischeri CADNFIAG00000086 N
PAAG_01538 Paracoccidioides sp lutzii PAAG_01538 N
PABG_03595 Paracoccidioides brasiliensis PABG_03595 N
Pc14g00630 Penicillium chrysogenum Pc14g00630 N
PDE_01436 Penicillium oxalicum PDE_01436 N
PDIP_67820 Penicillium digitatum PDIP_67820 N
PEX1_026460 Penicillium expansum PEX1_026460 N
PITC_090510 Penicillium italicum PITC_090510 N
PMAA_005670 Penicillium marneffei PMAA_005670 N
PMAA_005670 Talaromyces marneffei PMAA_005670 N
PVAR5_4424 Byssochlamys spectabilis PVAR5_4424 N
TEQG_04142 Trichophyton equinum TEQG_04142 N
TESG_01805 Trichophyton tonsurans TESG_01805 N
TRV_08126 Trichophyton verrucosum TRV_08126 N
TSTA_104270 Talaromyces stipitatus TSTA_104270 N
U727_00433631381 Penicillium solitum U727_00433631381 N
UREG_02530 Uncinocarpus reesii UREG_02530 N