cassava15834.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava15834.m1 T006812_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.710 0.880
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.710 0.880
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.710 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava15834.m1 AP2 38 89

Links

Other AP2 family TFs
Other Manihot esculenta TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000002005 Chlorocebus sabaeus ENSCSAG00000002005 I
ENSMMUP00000030454 Macaca fascicularis ENSMMUP00000030454 I
ENSNLEG00000005972 Nomascus leucogenys ENSNLEG00000005972 I
ENSPANG00000012793 Papio anubis ENSPANG00000012793 I
ENSPPYG00000010330 Pongo abelii ENSPPYG00000010330 I
ENSVPAG00000006670 Vicugna pacos ENSVPAG00000006670 I
ZNF350 Canis familiaris ENSCAFG00000003371 I
ZNF350 Dasypus novemcinctus ENSDNOG00000018413 I
ZNF350 Homo sapiens ENSG00000256683 D
ZNF350 Microcebus murinus ENSMICG00000008103 I
ZNF350 Macaca mulatta ENSMMUG00000023137 I
ZNF350 Otolemur garnettii ENSOGAG00000013266 I
ZNF350 Pan troglodytes ENSPTRG00000011402 I
ZNF432 Callithrix jacchus ENSCJAG00000002045 I