Bostr.10273s0198 (Boechera stricta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Bostr.10273s0198 T007551_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF019
M01092_2.00 		Arabidopsis thaliana
CRCCGRCV
BGYCGGYG		 PBM
Lambert et al.(2019)
pTH11534 		0.826 0.940
ERF019
M06571_2.00 		Arabidopsis thaliana
HDYCACCGACAHNNN
NNNDTGTCGGTGRHD		 Dap-seq
OMalley et al.(2016)
At1g22810_colamp_a 		0.826 0.940
ERF019
M06572_2.00 		Arabidopsis thaliana
DYCACCGHCRHHDYC
GRHDDYGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g22810_col 		0.826 0.940
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.10273s0198.1.p AP2 12 63

Links

Other AP2 family TFs
Other Boechera stricta TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008897 Ricinus communis 30174.m008897 I
30174.m008898 Ricinus communis 30174.m008898 I
AMTR_s00041p00044170 Amborella trichopoda AMTR_s00041p00044170 I
Aquca_013_00578 Aquilegia coerulea Aquca_013_00578 I
Aquca_017_00683 Aquilegia coerulea Aquca_017_00683 I
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I
BGIOSGA005344 Oryza indica BGIOSGA005344 I
BGIOSGA011118 Oryza indica BGIOSGA011118 I
Bo4g024610 Brassica oleracea Bo4g024610 I
Bo4g024620 Brassica oleracea Bo4g024620 I
Bo4g195510 Brassica oleracea Bo4g195510 I
Bo9g002150 Brassica oleracea Bo9g002150 I
Bostr.14547s0031 Boechera stricta Bostr.14547s0031 I
Bostr.25993s0234 Boechera stricta Bostr.25993s0234 I
Bra004910 Brassica rapa Bra004910 I
Bra016877 Brassica rapa Bra016877 I
Bra037322 Brassica rapa Bra037322 I
Bra040312 Brassica rapa Bra040312 I
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I
BRADI3G22510 Brachypodium distachyon BRADI3G22510 I
Cagra.0698s0022 Capsella grandiflora Cagra.0698s0022 I
Cagra.1261s0013 Capsella grandiflora Cagra.1261s0013 I
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I
Carubv10002489m.g Capsella rubella Carubv10002489m.g I
Carubv10025477m.g Capsella rubella Carubv10025477m.g I
Carubv10025548m.g Capsella rubella Carubv10025548m.g I
cassava15612.m1 Manihot esculenta cassava15612.m1 I
cassava28659.m1 Manihot esculenta cassava28659.m1 I
cassava28672.m1 Manihot esculenta cassava28672.m1 I
cassava36912.valid.m1 Manihot esculenta cassava36912.valid.m1 I
cassava40137.m1 Manihot esculenta cassava40137.m1 I
Ca_19598 Cicer arietinum Ca_19598 I
chr1.CM1255.40.nc Lotus japonicus chr1.CM1255.40.nc I
chr1.CM1255.90.nc Lotus japonicus chr1.CM1255.90.nc N
chr3.LjT44N20.90.nd Lotus japonicus chr3.LjT44N20.90.nd I
chr5.CM0494.160.nd Lotus japonicus chr5.CM0494.160.nd I
Ciclev10021992m.g Citrus clementina Ciclev10021992m.g I
Ciclev10022291m.g Citrus clementina Ciclev10022291m.g I
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I
Cla007068 Citrullus lanatus Cla007068 I
Cla007069 Citrullus lanatus Cla007069 I
Cla021625 Citrullus lanatus Cla021625 I
Cucsa.362830 Cucumis sativus Cucsa.362830 I
Cucsa.362840 Cucumis sativus Cucsa.362840 I
Eucgr.E01414 Eucalyptus grandis Eucgr.E01414 I
evm.TU.supercontig_18.117 Carica papaya evm.TU.supercontig_18.117 I
evm.TU.supercontig_18.118 Carica papaya evm.TU.supercontig_18.118 I
F775_22967 Aegilops tauschii F775_22967 I
gene19355-v1.0-hybrid Fragaria vesca gene19355-v1.0-hybrid I
gene19356-v1.0-hybrid Fragaria vesca gene19356-v1.0-hybrid I
GLYMA01G34523 Glycine max GLYMA01G34523 I
GLYMA03G02620 Glycine max GLYMA03G02620 I
GLYMA03G02631 Glycine max GLYMA03G02631 I
GLYMA10G04040 Glycine max GLYMA10G04040 I
GLYMA18G45320 Glycine max GLYMA18G45320 I
Gorai.001G251600 Gossypium raimondii Gorai.001G251600 I
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I
Gorai.004G219900 Gossypium raimondii Gorai.004G219900 I
Gorai.007G091600 Gossypium raimondii Gorai.007G091600 I
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I
Gorai.008G114300 Gossypium raimondii Gorai.008G114300 I
GRMZM2G075499 Zea mays GRMZM2G075499 I
GRMZM2G110913 Zea mays GRMZM2G110913 I
GRMZM2G150594 Zea mays GRMZM2G150594 I
GSMUA_Achr2G11240_001 Musa acuminata GSMUA_Achr2G11240_001 I
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I
GSMUA_Achr5G11330_001 Musa acuminata GSMUA_Achr5G11330_001 I
GSMUA_AchrUn_randomG10470_001 Musa acuminata GSMUA_AchrUn_randomG10470_001 I
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I
gw1.261.12.1 Physcomitrella patens gw1.261.12.1 I
gw1.42.84.1 Physcomitrella patens gw1.42.84.1 I
gw1.61.81.1 Physcomitrella patens gw1.61.81.1 I
LBD16 Arabidopsis thaliana AT2G42430 D
LBD16 Arabidopsis lyrata scaffold_403099.1 I
LBD19 Arabidopsis thaliana AT2G45410 D
LBD30 Arabidopsis thaliana AT4G00220 D
LBD30 Vitis vinifera VIT_15s0048g00830 I
LBD31 Arabidopsis thaliana AT4G00210 I
LjT35F15.70.nd Lotus japonicus LjT35F15.70.nd I
LPERR02G31040 Leersia perrieri LPERR02G31040 I
LPERR03G09330 Leersia perrieri LPERR03G09330 I
Lus10009298.g Linum usitatissimum Lus10009298.g I
MDP0000145761 Malus domestica MDP0000145761 I
MDP0000254224 Malus domestica MDP0000254224 I
MDP0000429067 Malus domestica MDP0000429067 I
MLOC_55239 Hordeum vulgare MLOC_55239 I
MTR_7g075230 Medicago truncatula MTR_7g075230 I
MTR_7g096530 Medicago truncatula MTR_7g096530 I
MTR_8g036105 Medicago truncatula MTR_8g036105 I
OB03G20590 Oryza brachyantha OB03G20590 I
OB08G30680 Oryza brachyantha OB08G30680 I
OB10G12360 Oryza brachyantha OB10G12360 I
OBART03G10450 Oryza barthii OBART03G10450 I
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I
OLONG_001985 Oryza longistaminata OLONG_001985 I
OLONG_028429 Oryza longistaminata OLONG_028429 I
OMERI02G35350 Oryza meridionalis OMERI02G35350 I
OMERI03G09680 Oryza meridionalis OMERI03G09680 I
ONIVA02G40360 Oryza nivara ONIVA02G40360 I
OPUNC03G10080 Oryza punctata OPUNC03G10080 I
orange1.1g036534m.g Citrus sinensis orange1.1g036534m.g I
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I
orange1.1g041368m.g Citrus sinensis orange1.1g041368m.g I
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I
OS02G0820500 Oryza sativa OS02G0820500 I
OS03G0246900 Oryza sativa OS03G0246900 I
Pavir.Ia03917 Panicum virgatum Pavir.Ia03917 I
Pavir.J03376 Panicum virgatum Pavir.J03376 I
Pavir.J34872 Panicum virgatum Pavir.J34872 I
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I
PGSC0003DMG400020069 Solanum tuberosum PGSC0003DMG400020069 I
PGSC0003DMG402012772 Solanum tuberosum PGSC0003DMG402012772 I
PK25573.1 Cannabis sativa PK25573.1 I
Pm017935 Prunus mume Pm017935 I
Pm017936 Prunus mume Pm017936 I
Pm020627 Prunus mume Pm020627 I
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I
POPTR_0002s14980 Populus trichocarpa POPTR_0002s14980 I
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I
POPTR_0014s06580 Populus trichocarpa POPTR_0014s06580 I
POPTR_0014s06590 Populus trichocarpa POPTR_0014s06590 I
PRUPE_ppa010383mg Prunus persica PRUPE_ppa010383mg I
PRUPE_ppa017589mg Prunus persica PRUPE_ppa017589mg I
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I
SapurV1A.0024s0780 Salix purpurea SapurV1A.0024s0780 I
SapurV1A.0024s0790 Salix purpurea SapurV1A.0024s0790 I
SapurV1A.0532s0190 Salix purpurea SapurV1A.0532s0190 I
SapurV1A.0532s0200 Salix purpurea SapurV1A.0532s0200 I
Sb01g024400 Sorghum bicolor Sb01g024400 I
Sb01g041130 Sorghum bicolor Sb01g041130 I
Sb04g037550 Sorghum bicolor Sb04g037550 I
SELMODRAFT_49270 Selaginella moellendorffii SELMODRAFT_49270 I
SELMODRAFT_59642 Selaginella moellendorffii SELMODRAFT_59642 I
Si015156m.g Setaria italica Si015156m.g I
Si019578m.g Setaria italica Si019578m.g I
Solyc06g083930.1 Solanum lycopersicum Solyc06g083930.1 I
TCM_005496 Theobroma cacao TCM_005496 I
TCM_005497 Theobroma cacao TCM_005497 I
Thhalv10001778m.g Eutrema salsugineum Thhalv10001778m.g I
Thhalv10028924m.g Eutrema salsugineum Thhalv10028924m.g I
Thhalv10028937m.g Eutrema salsugineum Thhalv10028937m.g I
Traes_4AS_5971FF832 Triticum aestivum Traes_4AS_5971FF832 I
Traes_4BL_3FB579782 Triticum aestivum Traes_4BL_3FB579782 I
Traes_4DL_A2012EA68 Triticum aestivum Traes_4DL_A2012EA68 I
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I
VIT_15s0048g00840 Vitis vinifera VIT_15s0048g00840 I