CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_10.254
(
Carica papaya
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
evm.TU.supercontig_10.254
T008254_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WIN1
M01603_2.00
Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB
PBM
Weirauch et al.(2014)
pTH7566
0.810
0.922
ERF003
M06667_2.00
Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH
Dap-seq
OMalley et al.(2016)
ESE3_col_a
0.754
0.843
ERF003
M06668_2.00
Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD
Dap-seq
OMalley et al.(2016)
ESE3_colamp_a
0.754
0.843
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_10.254
AP2
5
66
KKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMNGRSAKTNFPVST
Links
Other
AP2
family TFs
Other
Carica papaya
TFs
298 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R008171
Calypte anna
Aan_R008171
I
0.000
Afo_R004362
Aptenodytes forsteri
Afo_R004362
I
0.000
Alligator_sinensis_CCG005573.1
Alligator sinensis
Alligator_sinensis_CCG005573.1
I
0.000
BAC58028
Xenopus laevis
BAC58028
I
0.000
Brh_R010009
Buceros rhinoceros
Brh_R010009
I
0.000
CABZ01081359.1
Danio rerio
ENSDARG00000104578
I
0.000
Cmyd_10008669
Chelonia mydas
Cmyd_10008669
I
0.000
cxxc4
Danio rerio
ENSDARG00000077817
I
0.000
CXXC4
Homo sapiens
ENSG00000168772
I
0.000
CXXC4
Macaca mulatta
ENSMMUG00000011660
I
0.000
Cxxc4
Mus musculus
ENSMUSG00000044365
I
0.000
CXXC4
Pteropus vampyrus
ENSPVAG00000001501
I
0.000
Cxxc4
Rattus norvegicus
ENSRNOG00000045764
I
0.000
CXXC4
Sus scrofa
ENSSSCG00000025621
I
0.000
cxxc4
Takifugu rubripes
ENSTRUG00000004403
I
0.000
CXXC4
Tursiops truncatus
ENSTTRG00000011432
I
0.000
cxxc4
Xenopus tropicalis
XB-GENE-479477
I
0.000
CXXC5
Anolis carolinensis
ENSACAG00000002186
I
0.000
CXXC5
Bos taurus
ENSBTAG00000003986
I
0.000
CXXC5
Canis familiaris
ENSCAFG00000005714
I
0.000
CXXC5
Cavia porcellus
ENSCPOG00000001156
I
0.000
CXXC5
Dasypus novemcinctus
ENSDNOG00000008161
I
0.000
CXXC5
Equus caballus
ENSECAG00000016958
I
0.000
CXXC5
Erinaceus europaeus
ENSEEUG00000008125
I
0.000
CXXC5
Felis catus
ENSFCAG00000010527
I
0.000
CXXC5
Homo sapiens
ENSG00000171604
D
0.000
CXXC5
Gallus gallus
ENSGALG00000000884
I
0.000
CXXC5
Gorilla gorilla
ENSGGOG00000014181
I
0.000
CXXC5
Loxodonta africana
ENSLAFG00000011784
I
0.000
CXXC5
Meleagris gallopavo
ENSMGAG00000003042
I
0.000
CXXC5
Microcebus murinus
ENSMICG00000002899
I
0.000
CXXC5
Myotis lucifugus
ENSMLUG00000003056
I
0.000
CXXC5
Macaca mulatta
ENSMMUG00000001941
I
0.000
CXXC5
Monodelphis domestica
ENSMODG00000011772
I
0.000
Cxxc5
Mus musculus
ENSMUSG00000046668
I
0.000
CXXC5
Otolemur garnettii
ENSOGAG00000024233
I
0.000
CXXC5
Ochotona princeps
ENSOPRG00000003163
I
0.000
CXXC5
Procavia capensis
ENSPCAG00000001216
I
0.000
CXXC5
Pan troglodytes
ENSPTRG00000017304
I
0.000
Cxxc5
Rattus norvegicus
ENSRNOG00000003734
I
0.000
Cxxc5
Rattus norvegicus
ENSRNOG00000032878
I
0.000
CXXC5
Sorex araneus
ENSSARG00000013369
I
0.000
CXXC5
Tupaia belangeri
ENSTBEG00000006970
I
0.000
CXXC5
Taeniopygia guttata
ENSTGUG00000001608
I
0.000
CXXC5
Tursiops truncatus
ENSTTRG00000003771
I
0.000
cxxc5a
Danio rerio
ENSDARG00000078865
I
0.000
cxxc5a
Gasterosteus aculeatus
ENSGACG00000020657
I
0.000
cxxc5a
Oryzias latipes
ENSORLG00000006108
I
0.000
cxxc5a
Takifugu rubripes
ENSTRUG00000017014
I
0.000
cxxc5b
Danio rerio
ENSDARG00000075735
I
0.000
cxxc5b
Tetraodon nigroviridis
ENSTNIG00000000647
I
0.000
ENSAMEG00000011210
Ailuropoda melanoleuca
ENSAMEG00000011210
I
0.000
ENSAMEG00000011282
Ailuropoda melanoleuca
ENSAMEG00000011282
I
0.000
ENSAMXG00000005579
Astyanax mexicanus
ENSAMXG00000005579
I
0.000
ENSAMXG00000016016
Astyanax mexicanus
ENSAMXG00000016016
I
0.000
ENSAMXG00000018855
Astyanax mexicanus
ENSAMXG00000018855
I
0.000
ENSAMXG00000025596
Astyanax mexicanus
ENSAMXG00000025596
I
0.000
ENSAPLG00000014751
Anas platyrhynchos
ENSAPLG00000014751
I
0.000
ENSBTAG00000001751
Bos taurus
ENSBTAG00000001751
I
0.000
ENSBTAP00000005204-D1
Bos grunniens
ENSBTAP00000005204-D1
I
0.000
ENSCAFG00000031237
Canis familiaris
ENSCAFG00000031237
I
0.000
ENSCJAG00000015701
Callithrix jacchus
ENSCJAG00000015701
I
0.000
ENSCPOG00000021934
Cavia porcellus
ENSCPOG00000021934
I
0.000
ENSCSAG00000004010
Chlorocebus sabaeus
ENSCSAG00000004010
I
0.000
ENSCSAG00000013001
Chlorocebus sabaeus
ENSCSAG00000013001
I
0.000
ENSDORG00000003728
Dipodomys ordii
ENSDORG00000003728
I
0.000
ENSETEG00000009591
Echinops telfairi
ENSETEG00000009591
I
0.000
ENSFALG00000009467
Ficedula albicollis
ENSFALG00000009467
I
0.000
ENSGACG00000017555
Gasterosteus aculeatus
ENSGACG00000017555
I
0.000
ENSGGOG00000028495
Gorilla gorilla
ENSGGOG00000028495
I
0.000
ENSGMOG00000019280
Gadus morhua
ENSGMOG00000019280
I
0.000
ENSGMOG00000019812
Gadus morhua
ENSGMOG00000019812
I
0.000
ENSLACG00000003110
Latimeria chalumnae
ENSLACG00000003110
I
0.000
ENSLACG00000011147
Latimeria chalumnae
ENSLACG00000011147
I
0.000
ENSLAFG00000030012
Loxodonta africana
ENSLAFG00000030012
I
0.000
ENSLOCG00000012594
Lepisosteus oculatus
ENSLOCG00000012594
I
0.000
ENSLOCG00000012610
Lepisosteus oculatus
ENSLOCG00000012610
I
0.000
ENSMEUG00000015364
Macropus eugenii
ENSMEUG00000015364
I
0.000
ENSMLUG00000003691
Myotis lucifugus
ENSMLUG00000003691
I
0.000
ENSMODG00000020651
Monodelphis domestica
ENSMODG00000020651
I
0.000
ENSMPUG00000009101
Mustela putorius furo
ENSMPUG00000009101
I
0.000
ENSMPUG00000009175
Mustela putorius furo
ENSMPUG00000009175
I
0.000
ENSNLEG00000009189
Nomascus leucogenys
ENSNLEG00000009189
I
0.000
ENSNLEG00000013306
Nomascus leucogenys
ENSNLEG00000013306
I
0.000
ENSOANG00000008235
Ornithorhynchus anatinus
ENSOANG00000008235
I
0.000
ENSOANG00000009530
Ornithorhynchus anatinus
ENSOANG00000009530
I
0.000
ENSOARG00000010827
Ovis aries
ENSOARG00000010827
I
0.000
ENSOCUG00000015536
Oryctolagus cuniculus
ENSOCUG00000015536
I
0.000
ENSOGAG00000026362
Otolemur garnettii
ENSOGAG00000026362
I
0.000
ENSONIG00000005000
Oreochromis niloticus
ENSONIG00000005000
I
0.000
ENSONIG00000017539
Oreochromis niloticus
ENSONIG00000017539
I
0.000
ENSORLG00000006474
Oryzias latipes
ENSORLG00000006474
I
0.000
ENSP00000302543
Macaca fascicularis
ENSP00000302543
I
0.000
ENSP00000378248
Macaca fascicularis
ENSP00000378248
I
0.000
ENSP00000378248-D1
Bos grunniens
ENSP00000378248-D1
I
0.000
ENSPANG00000011930
Papio anubis
ENSPANG00000011930
I
0.000
ENSPCAG00000002905
Procavia capensis
ENSPCAG00000002905
I
0.000
ENSPFOG00000003666
Poecilia formosa
ENSPFOG00000003666
I
0.000
ENSPFOG00000012064
Poecilia formosa
ENSPFOG00000012064
I
0.000
ENSPFOG00000012083
Poecilia formosa
ENSPFOG00000012083
I
0.000
ENSPFOG00000018974
Poecilia formosa
ENSPFOG00000018974
I
0.000
ENSPFOG00000019888
Poecilia formosa
ENSPFOG00000019888
I
0.000
ENSPPYG00000014973
Pongo abelii
ENSPPYG00000014973
I
0.000
ENSPPYG00000015845
Pongo abelii
ENSPPYG00000015845
I
0.000
ENSPSIG00000010569
Pelodiscus sinensis
ENSPSIG00000010569
I
0.000
ENSPSIG00000013782
Pelodiscus sinensis
ENSPSIG00000013782
I
0.000
ENSPTRG00000016332
Pan troglodytes
ENSPTRG00000016332
I
0.000
ENSSARG00000013794
Sorex araneus
ENSSARG00000013794
I
0.000
ENSSHAG00000002308
Sarcophilus harrisii
ENSSHAG00000002308
I
0.000
ENSSHAG00000012293
Sarcophilus harrisii
ENSSHAG00000012293
I
0.000
ENSSSCG00000009159
Sus scrofa
ENSSSCG00000009159
I
0.000
ENSSSCG00000014357
Sus scrofa
ENSSSCG00000014357
I
0.000
ENSSTOG00000020058
Ictidomys tridecemlineatus
ENSSTOG00000020058
I
0.000
ENSSTOG00000025994
Ictidomys tridecemlineatus
ENSSTOG00000025994
I
0.000
ENSTGUG00000003779
Taeniopygia guttata
ENSTGUG00000003779
I
0.000
ENSTNIG00000018036
Tetraodon nigroviridis
ENSTNIG00000018036
I
0.000
ENSTRUG00000017756
Takifugu rubripes
ENSTRUG00000017756
I
0.000
ENSVPAG00000010751
Vicugna pacos
ENSVPAG00000010751
I
0.000
ENSXMAG00000005442
Xiphophorus maculatus
ENSXMAG00000005442
I
0.000
ENSXMAG00000011127
Xiphophorus maculatus
ENSXMAG00000011127
I
0.000
Gfo_R011184
Geospiza fortis
Gfo_R011184
I
0.000
Myotis_brandtii_Cxxc4_10030627
Myotis brandtii
Myotis_brandtii_Cxxc4_10030627
I
0.000
Myotis_brandtii_CXXC5_10027816
Myotis brandtii
Myotis_brandtii_CXXC5_10027816
I
0.000
Ogr13317
Ophisaurus gracilis
Ogr13317
I
0.000
Pvit_06919
Pogona vitticeps
Pvit_06919
I
0.000
Pvit_12827
Pogona vitticeps
Pvit_12827
I
0.000