CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10005513.g
(
Linum usitatissimum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Lus10005513.g
T008748_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10005513
AP2
52
109
SIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGP
Lus10005513
AP2
171
190
ATQEEAATAYDMAAIEYRGL
Links
Other
AP2
family TFs
Other
Linum usitatissimum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
chr6.CM0041.30.nd
Lotus japonicus
chr6.CM0041.30.nd
N
0.574
Ciclev10010237m.g
Citrus clementina
Ciclev10010237m.g
N
0.574
Lus10001553.g
Linum usitatissimum
Lus10001553.g
N
0.574
MTR_2g460730
Medicago truncatula
MTR_2g460730
N
0.574
POPTR_0018s11110
Populus trichocarpa
POPTR_0018s11110
N
0.574